The BabySeq project: implementing genomic sequencing in newborns

被引:131
作者
Holm, Ingrid A. [1 ,2 ]
Agrawal, Pankaj B. [1 ,2 ,3 ]
Ceyhan-Birsoy, Ozge [4 ,5 ,6 ]
Christensen, Kurt D. [7 ,8 ]
Fayer, Shawn [7 ]
Frankel, Leslie A. [9 ,10 ]
Genetti, Casie A. [1 ]
Krier, Joel B. [7 ,8 ]
Lamay, Rebecca C. [7 ]
Levy, Harvey L. [1 ,2 ]
McGuire, Amy L. [9 ]
Parad, Richard B. [2 ,3 ,11 ]
Park, Peter J. [7 ,12 ]
Pereira, Stacey [9 ]
Rehm, Heidi L. [4 ,5 ,13 ]
Schwartz, Talia S. [1 ]
Waisbren, Susan E. [1 ,2 ]
Yu, Timothy W. [1 ,2 ,13 ]
Green, Robert C. [7 ,8 ,13 ]
Beggs, Alan H. [1 ,2 ]
机构
[1] Boston Childrens Hosp, Manton Ctr Orphan Dis Res, Div Genet & Gen, Boston, MA 02115 USA
[2] Harvard Med Sch, Dept Pediat, Boston, MA USA
[3] Boston Childrens Hosp, Div Newborn Med, Boston, MA USA
[4] Partners Healthcare Personalized Med, Lab Mol Med, Cambridge, MA USA
[5] Harvard Med Sch, Brigham & Womens Hosp, Dept Pathol, Boston, MA USA
[6] Mem Sloan Kettering Canc Ctr, Dept Pathol, 1275 York Ave, New York, NY 10021 USA
[7] Brigham & Womens Hosp, Dept Med, Div Genet, 75 Francis St, Boston, MA 02115 USA
[8] Harvard Med Sch, Boston, MA USA
[9] Baylor Coll Med, Ctr Med Eth & Hlth Policy, Houston, TX 77030 USA
[10] Univ Houston, Coll Educ, Dept Psychol Hlth & Learning Sci, Houston, TX USA
[11] Brigham & Womens Hosp, Dept Pediat Newborn Med, 75 Francis St, Boston, MA 02115 USA
[12] Harvard Med Sch, Dept Biomed Informat, Boston, MA USA
[13] Broad Inst MIT & Harvard, Cambridge, MA 02142 USA
基金
美国国家卫生研究院;
关键词
Newborn screening; Newborn sequencing; Whole exome sequencing; Methods; Randomized trial; Ethical; legal; social implications; CLINICIAN INTERFACE; KNOWLEDGE; VARIANTS; MEDICINE; DISEASES; CHILDREN; HEALTH;
D O I
10.1186/s12887-018-1200-1
中图分类号
R72 [儿科学];
学科分类号
100202 ;
摘要
Background: The greatest opportunity for lifelong impact of genomic sequencing is during the newborn period. The "BabySeq Project" is a randomized trial that explores the medical, behavioral, and economic impacts of integrating genomic sequencing into the care of healthy and sick newborns. Methods: Families of newborns are enrolled from Boston Children's Hospital and Brigham and Women's Hospital nurseries, and half are randomized to receive genomic sequencing and a report that includes monogenic disease variants, recessive carrier variants for childhood onset or actionable disorders, and pharmacogenomic variants. All families participate in a disclosure session, which includes the return of results for those in the sequencing arm. Outcomes are collected through review of medical records and surveys of parents and health care providers and include the rationale for choice of genes and variants to report; what genomic data adds to the medical management of sick and healthy babies; and the medical, behavioral, and economic impacts of integrating genomic sequencing into the care of healthy and sick newborns. Discussion: The BabySeq Project will provide empirical data about the risks, benefits and costs of newborn genomic sequencing and will inform policy decisions related to universal genomic screening of newborns.
引用
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页数:10
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