An angiogenesis-related long noncoding RNA signature correlates with prognosis in patients with hepatocellular carcinoma

被引:12
|
作者
Lei, Dengliang [1 ,2 ]
Chen, Yue [2 ]
Zhou, Yang [1 ,2 ]
Hu, Gangli [1 ,2 ]
Luo, Fang [1 ]
机构
[1] Chongqing Med Univ, Affiliated Hosp 1, Dept Hepatobiliary Surg, Chongqing 400016, Peoples R China
[2] Chongqing Med Univ, Affiliated Hosp 1, Cent Lab, Chongqing 400016, Peoples R China
基金
中国国家自然科学基金;
关键词
ENDOTHELIAL GROWTH-FACTOR; CANCER STATISTICS; TUMOR; HOTAIR; MECHANISMS; LNCRNA; HCC;
D O I
10.1042/BSR20204442
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Hepatocellular carcinoma (HCC) is one of the most prevalent and lethal cancers worldwide. Neovascularization is closely related to the malignancy of tumors. We constructed a signature of angiogenesis-related long noncoding RNA (lncRNA) to predict the prognosis of patients with HCC. The lncRNA expression matrix of 424 HCC patients was downloaded from The Cancer Genome Atlas (TCGA). First, gene set enrichment analysis (GSEA) was used to distinguish the differentially expressed genes of the angiogenesis genes in liver cancer and adjacent tissues. Next, a signature of angiogenesis-related lncRNAs was constructed using univariate and multivariate analyses, and receiver operating characteristic (ROC) curves were used to assess the accuracy. The signature and relevant clinical information were used to construct the nomogram. A 5-lncRNA signature was highly correlated with overall survival (OS) in HCC patients and performed well in evaluations using the C-index, areas under the curve, and calibration curves. In summary, the 5-lncRNA model can serve as an accurate signature to predict the prognosis of patients with liver cancer, but its mechanism of action must be further elucidated by experiments.
引用
收藏
页数:14
相关论文
共 50 条
  • [41] The expression and function of long noncoding RNAs in hepatocellular carcinoma
    Du, Jingli
    Su, Yue
    Gao, Jianzhi
    Tai, Yanhong
    CANCER INNOVATION, 2023, 2 (06): : 488 - 499
  • [42] Long noncoding RNA, the methylation of genomic elements and their emerging crosstalk in hepatocellular carcinoma
    Yuan, Sheng-xian
    Zhang, Jin
    Xu, Qing-guo
    Yang, Yuan
    Zhou, Wei-ping
    CANCER LETTERS, 2016, 379 (02) : 239 - 244
  • [43] Screening and verification of long noncoding RNA promoter methylation sites in hepatocellular carcinoma
    Zhuo Lin
    Xiaofeng Ni
    Shengjie Dai
    Hao Chen
    Jianhui Chen
    Boda Wu
    Jianyang Ao
    Keqing Shi
    Hongwei Sun
    Cancer Cell International, 20
  • [44] Screening and verification of long noncoding RNA promoter methylation sites in hepatocellular carcinoma
    Lin, Zhuo
    Ni, Xiaofeng
    Dai, Shengjie
    Chen, Hao
    Chen, Jianhui
    Wu, Boda
    Ao, Jianyang
    Shi, Keqing
    Sun, Hongwei
    CANCER CELL INTERNATIONAL, 2020, 20 (01)
  • [45] Anoikis-related lncRNA signature predicts prognosis and is associated with immune infiltration in hepatocellular carcinoma
    Zhu, Jiahong
    Zhao, Wenjing
    Yang, Junkai
    Liu, Cheng
    Wang, Yilang
    Zhao, Hui
    ANTI-CANCER DRUGS, 2024, 35 (05) : 466 - 480
  • [46] The interferon gamma-related long noncoding RNA signature predicts prognosis and indicates immune microenvironment infiltration in colon adenocarcinoma
    Liu, Cong
    Liu, Dingwei
    Xie, Yong
    JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY, 2023, 38 : 52 - 52
  • [47] The interferon gamma-related long noncoding RNA signature predicts prognosis and indicates immune microenvironment infiltration in colon adenocarcinoma
    Liu, Cong
    Liu, Dingwei
    Xie, Yong
    JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY, 2023, 38 : 52 - 52
  • [48] Identification and Validation of a Novel Necroptosis-Related Long Noncoding RNA Prognostic Signature for Lung Adenocarcinoma
    Zeng, Cheng
    Yu, Huayi
    Liu, Xiuling
    Liu, Qian
    Jin, Jianhua
    BIOMED RESEARCH INTERNATIONAL, 2022, 2022
  • [49] The Interferon Gamma-Related Long Noncoding RNA Signature Predicts Prognosis and Indicates Immune Microenvironment Infiltration in Colon Adenocarcinoma
    Liu, Cong
    Liu, Dingwei
    Wang, Fangfei
    Xie, Jun
    Liu, Yang
    Wang, Huan
    Rong, Jianfang
    Xie, Jinliang
    Wang, Jinyun
    Zeng, Rong
    Xie, Yong
    FRONTIERS IN ONCOLOGY, 2022, 12
  • [50] Development of a novel six-long noncoding RNA signature predicting survival of patients with bladder urothelial carcinoma
    Gao, Xin
    Zhang, Shufang
    Chen, Yinyi
    Wen, Xiaohong
    Chen, Mei
    Wang, Shunlan
    Zhang, Yingai
    JOURNAL OF CELLULAR BIOCHEMISTRY, 2019, 120 (12) : 19796 - 19809