OOTFD (Object-Oriented Transcription Factors Database): an object-oriented successor to TFD

被引:15
作者
Ghosh, D [1 ]
机构
[1] Inst Transcript Informat, Pittsburgh, PA 15230 USA
关键词
D O I
10.1093/nar/26.1.360
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
ooTFD (object-oriented Transcription Factors Database) is a successor to TFD (Transcription Factors Database), ooTFD contains information represented in TFD but also allows the representation of containment, composite, and interaction relationships between transcription factor polypeptides. ooTFD is designed to represent information about all transcription factors, both eukaryotic and prokaryotic, basal as well as regulatory factors, and multiprotein complexes as well as monomers, ooTFD and associated tools and services can be accessed at http://www.isbi.net/.
引用
收藏
页码:360 / 361
页数:2
相关论文
共 9 条
[1]   A RELATIONAL DATABASE OF TRANSCRIPTION FACTORS [J].
GHOSH, D .
NUCLEIC ACIDS RESEARCH, 1990, 18 (07) :1749-1756
[2]  
GHOSH D, 1996, TRANSCRIPTION FACTOR, P82
[3]  
Gribskov M, 1994, Methods Mol Biol, V25, P247
[4]   Databases on transcriptional regulation: TRANSFAC, TRRD and COMPEL [J].
Heinemeyer, T ;
Wingender, E ;
Reuter, I ;
Hermjakob, H ;
Kel, AE ;
Kel, OV ;
Ignatieva, EV ;
Ananko, EA ;
Podkolodnaya, OA ;
Kolpakov, FA ;
Podkolodny, NL ;
Kolchanov, NA .
NUCLEIC ACIDS RESEARCH, 1998, 26 (01) :362-367
[5]   ROL: A deductive object base language [J].
Liu, MC .
INFORMATION SYSTEMS, 1996, 21 (05) :431-457
[6]   The Nuclear Receptor Resource project [J].
Martinez, E ;
Moore, DD ;
Keller, E ;
Pearce, D ;
Robinson, V ;
MacDonald, PN ;
Simons, SS ;
Sanchez, E ;
Danielsen, M .
NUCLEIC ACIDS RESEARCH, 1997, 25 (01) :163-165
[7]   The Nuclear Receptor Resource: a growing family [J].
Martinez, E ;
Moore, DD ;
Keller, E ;
Pearce, D ;
Vanden Heuvel, JP ;
Robinson, V ;
Gottlieb, B ;
MacDonald, P ;
Simons, S ;
Sanchez, E ;
Danielsen, M .
NUCLEIC ACIDS RESEARCH, 1998, 26 (01) :239-241
[8]  
ONO N, 1996, P INT S COOP DAT SYS, V2, P376
[9]   TRANSFAC, TRRD and COMPEL: Towards a federated database system on transcriptional regulation [J].
Wingender, E ;
Kel, AE ;
Kel, OV ;
Karas, H ;
Heinemeyer, T ;
Dietze, P ;
Knuppel, R ;
Romaschenko, AG ;
Kolchanov, NA .
NUCLEIC ACIDS RESEARCH, 1997, 25 (01) :265-268