Morphological and molecular barcode analysis of the medicinal tree Mimusops coriacea (A.DC.) Miq. collected in Ecuador

被引:10
作者
Bustamante, Katherine [1 ]
Santos-Ordonez, Efren [2 ,3 ]
Miranda, Migdalia [4 ]
Pacheco, Ricardo [2 ]
Gutierrez, Yamilet [5 ]
Scull, Ramon [5 ]
机构
[1] Univ Guayaquil, Ciudadela Univ Salvador Allende, Fac Ciencias Quim, Guayaquil, Ecuador
[2] ESPOL Polytech Univ, Escuela Super Politecn Litoral, Ctr Invest Biotecnol Ecuador, Guayaquil, Ecuador
[3] ESPOL Polytech Univ, Escuela Super Politecn Litoral, ESPOL, Fac Ciencias Vida, Guayaquil, Ecuador
[4] ESPOL Polytech Univ, Fac Ciencias Nat & Matemat, Escuela Super Politecn Litoral, ESPOL, Guayaquil, Ecuador
[5] Univ La Habana, Inst Farm & Alimentos, Havana, Cuba
关键词
rbcL; matK; ITS1; ITS2; Medicinal; DNA BARCODE; DIVERSIFICATION;
D O I
10.7717/peerj.7789
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background: Mimusops coriacea (A.DC.) Miq., (Sapotaceae), originated from Africa, were introduced to coastal areas in Ecuador where it is not extensively used as a traditional medicine to treat various human diseases. Different therapeutically uses of the species include: analgesic, antimicrobial, hypoglycemic, inflammation and pain relieve associated with bone and articulation-related diseases. Furthermore, Mimusops coriacea could be used as anti-oxidant agent. However, botanical, chemical or molecular barcode information related to this much used species is not available from Ecuador. In this study, morphological characterization was performed from leaves, stem and seeds. Furthermore, genetic characterization was performed using molecular barcodes for rbcL, matk, ITS1 and ITS2 using DNA extracted from leaves. Methods: Macro-morphological description was performed on fresh leaves, stem and seeds. For anatomical evaluation, tissues were embedded in paraffin and transversal dissections were done following incubation with sodium hypochlorite and safranin for coloration and fixated later in glycerinated gelatin. DNA extraction was performed using a modified CTAB protocol from leaf tissues, while amplification by PCR was accomplished for the molecular barcodes rbcL, matK, ITS1 and ITS2. Sequence analysis was performed using blast in the GenBank. Phylogenetic analysis was performed with accessions queried in the GenBank belonging to the subfamily Sapotoideae. Results: Leaf size was 13.56 +/- 1.46 x 7.49 +/- 0.65 cm; where is a macro-morphological description of the stem (see Methods). The peel of the seeds is dark brown. Sequence analysis revealed that amplicons were generated using the four barcodes selected. Phylogenetic analysis indicated that the barcodes rbcL and matK, were not discriminated between species within the same genus of the subfamily Sapotoideae. On the other hand, the ITS1 and ITS2 were discriminative at the level of genus and species of the Sapotoideae.
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页数:14
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