The origin of the odorant receptor gene family in insects

被引：101

作者：

Brand, Philipp ^{[1
]}

Robertson, Hugh M. ^{[2
]}

Lin, Wei ^{[3
]}

Pothula, Ratnasri ^{[4
]}

Klingeman, William E. ^{[5
]}

Jurat-Fuentes, Juan Luis ^{[4
]}

Johnson, Brian R. ^{[3
]}

机构：

[1] Univ Calif Davis, Ctr Populat Biol, Dept Evolut & Ecol, Davis, CA 95616 USA

[2] Univ Illinois, Dept Entomol, Urbana, IL 61820 USA

[3] Univ Calif Davis, Dept Entomol & Nematol, Davis, CA 95616 USA

[4] Univ Tennessee, Dept Entomol & Plant Pathol, Knoxville, TN 37901 USA

[5] Univ Tennessee, Dept Plant Sci, Knoxville, TN USA

来源：

ELIFE | 2018年 / 7卷

基金：

美国国家科学基金会;

关键词：

DRAFT GENOME; EVOLUTIONARY DYNAMICS; MOLECULAR EVOLUTION; SUPERFAMILY; INSIGHTS; SYSTEM;

D O I：

10.7554/eLife.38340

中图分类号：

Q [生物科学];

学科分类号：

07 ; 0710 ; 09 ;

摘要：

The origin of the insect odorant receptor (OR) gene family has been hypothesized to have coincided with the evolution of terrestriality in insects. Missbach et al. (2014) suggested that ORs instead evolved with an ancestral OR co-receptor (Orco) after the origin of terrestriality and the OR/Orco system is an adaptation to winged flight in insects. We investigated genomes of the Collembola, Diplura, Archaeognatha, Zygentoma, Odonata, and Ephemeroptera, and find ORs present in all insect genomes but absent from lineages predating the evolution of insects. Orco is absent only in the ancestrally wingless insect lineage Archaeognatha. Our new genome sequence of the zygentoman firebrat Thermobia domestica reveals a full OR/Orco system. We conclude that ORs evolved before winged flight, perhaps as an adaptation to terrestriality, representing a key evolutionary novelty in the ancestor of all insects, and hence a molecular synapomorphy for the Class Insecta.

引用

页数：13

共 51 条

[11]

Groh-Lunow KC, 2014, FRONTIERS CELLULAR N, V8, pe198

[12] Genomic insights into the Ixodes scapularis tick vector of Lyme disease [J].

Gulia-Nuss, Monika ;

Nuss, Andrew B. ;

Meyer, Jason M. ;

Sonenshine, Daniel E. ;

Roe, R. Michael ;

Waterhouse, Robert M. ;

Sattelle, David B. ;

de la Fuente, Jose ;

Ribeiro, Jose M. ;

Megy, Karine ;

Thimmapuram, Jyothi ;

Miller, Jason R. ;

Walenz, Brian P. ;

Koren, Sergey ;

Hostetler, Jessica B. ;

Thiagarajan, Mathangi ;

Joardar, Vinita S. ;

Hannick, Linda I. ;

Bidwell, Shelby ;

Hammond, Martin P. ;

Young, Sarah ;

Zeng, Qiandong ;

Abrudan, Jenica L. ;

Almeida, Francisca C. ;

Ayllon, Nieves ;

Bhide, Ketaki ;

Bissinger, Brooke W. ;

Bonzon-Kulichenko, Elena ;

Buckingham, Steven D. ;

Caffrey, Daniel R. ;

Caimano, Melissa J. ;

Croset, Vincent ;

Driscoll, Timothy ;

Gilbert, Don ;

Gillespie, Joseph J. ;

Giraldo-Calderon, Gloria I. ;

Grabowski, Jeffrey M. ;

Jiang, David ;

Khalil, Sayed M. S. ;

Kim, Donghun ;

Kocan, Katherine M. ;

Koci, Juraj ;

Kuhn, Richard J. ;

Kurtti, Timothy J. ;

Lees, Kristin ;

Lang, Emma G. ;

Kennedy, Ryan C. ;

Kwon, Hyeogsun ;

Perera, Rushika ;

Qi, Yumin .

NATURE COMMUNICATIONS, 2016, 7

[13] Evolution of Insect Olfaction [J].

Hansson, Bill S. ;

Stensmyr, Marcus C. .

NEURON, 2011, 72 (05) :698-711

[14] Genomic Features of the Damselfly Calopteryx splendens Representing a Sister Clade to Most Insect Orders [J].

Ioannidis, Panagiotis ;

Simao, Felipe A. ;

Waterhouse, Robert M. ;

Manni, Mose ;

Seppey, Mathieu ;

Robertson, Hugh M. ;

Misof, Bernhard ;

Niehuis, Oliver ;

Zdobnov, Evgeny M. .

GENOME BIOLOGY AND EVOLUTION, 2017, 9 (02) :415-430

[15] Genomic signatures of evolutionary transitions from solitary to group living [J].

Kapheim, Karen M. ;

Pan, Hailin ;

Li, Cai ;

Salzberg, Steven L. ;

Puiu, Daniela ;

Magoc, Tanja ;

Robertson, Hugh M. ;

Hudson, Matthew E. ;

Venkat, Aarti ;

Fischman, Brielle J. ;

Hernandez, Alvaro ;

Yandell, Mark ;

Ence, Daniel ;

Holt, Carson ;

Yocum, George D. ;

Kemp, William P. ;

Bosch, Jordi ;

Waterhouse, Robert M. ;

Zdobnov, Evgeny M. ;

Stolle, Eckart ;

Kraus, F. Bernhard ;

Helbing, Sophie ;

Moritz, Robin F. A. ;

Glastad, Karl M. ;

Hunt, Brendan G. ;

Goodisman, Michael A. D. ;

Hauser, Frank ;

Grimmelikhuijzen, Cornelis J. P. ;

Pinheiro, Daniel Guariz ;

Franco Nunes, Francis Morais ;

Miranda Soares, Michelle Prioli ;

Tanaka, Erica Donato ;

Paulino Simoes, Zila Luz ;

Hartfelder, Klaus ;

Evans, Jay D. ;

Barribeau, Seth M. ;

Johnson, Reed M. ;

Massey, Jonathan H. ;

Southey, Bruce R. ;

Hasselmann, Martin ;

Hamacher, Daniel ;

Biewer, Matthias ;

Kent, Clement F. ;

Zayed, Amro ;

Blatti, Charles, III ;

Sinha, Saurabh ;

Johnston, J. Spencer ;

Hanrahan, Shawn J. ;

Kocher, Sarah D. ;

Wang, Jun .

SCIENCE, 2015, 348 (6239) :1139-1143

[16] Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle [J].

Kirkness, Ewen F. ;

Haas, Brian J. ;

Sun, Weilin ;

Braig, Henk R. ;

Perotti, M. Alejandra ;

Clark, John M. ;

Lee, Si Hyeock ;

Robertson, Hugh M. ;

Kennedy, Ryan C. ;

Elhaik, Eran ;

Gerlach, Daniel ;

Kriventseva, Evgenia V. ;

Elsik, Christine G. ;

Graur, Dan ;

Hill, Catherine A. ;

Veenstra, Jan A. ;

Walenz, Brian ;

Tubio, Jose Manuel C. ;

Ribeiro, Jose M. C. ;

Rozas, Julio ;

Johnston, J. Spencer ;

Reese, Justin T. ;

Popadic, Aleksandar ;

Tojo, Marta ;

Raoult, Didier ;

Reed, David L. ;

Tomoyasu, Yoshinori ;

Krause, Emily ;

Mittapalli, Omprakash ;

Margam, Venu M. ;

Li, Hong-Mei ;

Meyer, Jason M. ;

Johnson, Reed M. ;

Romero-Severson, Jeanne ;

VanZee, Janice Pagel ;

Alvarez-Ponce, David ;

Vieira, Filipe G. ;

Aguade, Montserrat ;

Guirao-Rico, Sara ;

Anzola, Juan M. ;

Yoon, Kyong S. ;

Strycharz, Joseph P. ;

Unger, Maria F. ;

Christley, Scott ;

Lobo, Neil F. ;

Seufferheld, Manfredo J. ;

Wang, NaiKuan ;

Dasch, Gregory A. ;

Struchiner, Claudio J. ;

Madey, Greg .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2010, 107 (27) :12168-12173

[17] Clustal W and clustal X version 2.0 [J].

Larkin, M. A. ;

Blackshields, G. ;

Brown, N. P. ;

Chenna, R. ;

McGettigan, P. A. ;

McWilliam, H. ;

Valentin, F. ;

Wallace, I. M. ;

Wilm, A. ;

Lopez, R. ;

Thompson, J. D. ;

Gibson, T. J. ;

Higgins, D. G. .

BIOINFORMATICS, 2007, 23 (21) :2947-2948

[18] Or83b encodes a broadly expressed odorant receptor essential for Drosophila olfaction [J].

Larsson, MC ;

Domingos, AI ;

Jones, WD ;

Chiappe, ME ;

Amrein, H ;

Vosshall, LB .

NEURON, 2004, 43 (05) :703-714

[19] Evaluation of DISCOVAR de novo using a mosquito sample for cost-effective short-read genome assembly [J].

Love, R. Rebecca ;

Weisenfeld, Neil I. ;

Jaffe, David B. ;

Besansky, Nora J. ;

Neafsey, Daniel E. .

BMC GENOMICS, 2016, 17

[20] A fast, lock-free approach for efficient parallel counting of occurrences of k-mers [J].

Marcais, Guillaume ;

Kingsford, Carl .

BIOINFORMATICS, 2011, 27 (06) :764-770

← 1 2 3 4 5 6 →