Inhomogeneous Poisson point process for species distribution modelling: relative performance of methods accounting for sampling bias and imperfect detection

被引:2
作者
Mugumaarhahama, Yannick [1 ,2 ]
Fandohan, Adande Belarmain [1 ,3 ]
Mushagalusa, Arsene Ciza [1 ,2 ]
Sode, Idelphonse Akoeugnigan [1 ]
Glele Kakai, Romain L. [1 ]
机构
[1] Univ Abomey Calavi, Fac Agron Sci, Lab Biomath & Estimat Forestieres, 01 POB 526, Cotonou, Benin
[2] Univ Evangel Afrique, Fac Agr & Environm Sci, Unit Appl Biostat, POB 3323, Bukavu, DEM REP CONGO
[3] Univ Natl Agr, Ecole Foresterie Trop, Unite Rech Foresterie & Conservat Bioressources, POB 45, Ketou, Benin
关键词
Integrated Species distribution models; Hierarchical models; Maximum likelihood estimates; Data quality; Presence-only data; Point-count; Site-occupancy; PRESENCE-ONLY DATA; PRESENCE-ABSENCE; SPATIAL AUTOCORRELATION; STATISTICAL-MODELS; OCCUPANCY; UNCERTAINTY; ABUNDANCE;
D O I
10.1007/s40808-022-01417-3
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
Species distribution models (SDMs) have become tools of great importance in ecology, as advanced knowledge of suitable species habitat is required for the process of global biodiversity conservation. Presence-only data are the more abundant and readily available data widely used in SDM applications. These data should be treated as a thinned Poisson process to account for detection errors related to sampling bias and imperfect detection that arise in them. Failure to do so could be detrimental to SDM's predictions. This study assesses the effects of the species abundance, the variation in detection probability, and the number of sites visited in planned surveys on the performance of SDMs accounting for detection errors using simulated data. The results show that the accuracy and precision of estimates differ depending on models and species abundance. Their main difference lies in their ability to estimate beta(0), the model intercept. The lower the species abundance, the higher the bias and variance of (beta) over cap (0). Furthermore, the lower the detection probability, the higher the bias and variance of (beta) over cap (0). However, beta(1), the slope parameter, is estimated with almost high accuracy and precision for all models. This study demonstrates the low efficiency of accounting for sampling bias and imperfect detection based on presence-only data alone. Analysing presence-only data in conjunction with point-count outperformed the other approaches, whatever the species abundance, as long as the detection probability is at least 0.25 with average values of detectability covariates. The acceptable accuracy and precision, the minimum number of sites to consider vary depending on species abundance. At least 200 sites are required for the rare species, whereas 50 sites can suffice for the abundant species. Since collecting high-quality data are very expensive, this study emphasizes the need to promote initiatives such as citizen science programs that aim to collect species occurrence data with as little bias as possible.
引用
收藏
页码:5419 / 5432
页数:14
相关论文
共 47 条
[1]   Comparative interpretation of count, presence-absence and point methods for species distribution models [J].
Aarts, Geert ;
Fieberg, John ;
Matthiopoulos, Jason .
METHODS IN ECOLOGY AND EVOLUTION, 2012, 3 (01) :177-187
[2]   Error and uncertainty in habitat models [J].
Barry, Simon ;
Elith, Jane .
JOURNAL OF APPLIED ECOLOGY, 2006, 43 (03) :413-423
[3]   Presence-absence versus presence-only modelling methods for predicting bird habitat suitability [J].
Brotons, L ;
Thuiller, W ;
Araújo, MB ;
Hirzel, AH .
ECOGRAPHY, 2004, 27 (04) :437-448
[4]   Species distribution modelling and imperfect detection: comparing occupancy versus consensus methods [J].
Comte, Lise ;
Grenouillet, Gael .
DIVERSITY AND DISTRIBUTIONS, 2013, 19 (08) :996-1007
[5]   Using habitat suitability models to target invasive plant species surveys [J].
Crall, Alycia W. ;
Jarnevich, Catherine S. ;
Panke, Brendon ;
Young, Nick ;
Renz, Mark ;
Morisette, Jeffrey .
ECOLOGICAL APPLICATIONS, 2013, 23 (01) :60-72
[6]   Potential species distribution modeling and the use of principal component analysis as predictor variables [J].
Cruz-Cardenas, Gustavo ;
Lopez-Mata, Lauro ;
Luis Villasenor, Jose ;
Ortiz, Enrique .
REVISTA MEXICANA DE BIODIVERSIDAD, 2014, 85 (01) :189-199
[7]   Home-range and activity patterns of the south American subterranean rodent Ctenomys talarum [J].
Cutrera, A. P. ;
Antinuchi, C. D. ;
Mora, M. S. ;
Vassallo, A. I. .
JOURNAL OF MAMMALOGY, 2006, 87 (06) :1183-1191
[8]   Something from nothing: Using landscape similarity and ecological niche modeling to find rare plant species [J].
de Siqueira, Marinez Ferreira ;
Durigan, Giselda ;
de Marco Junior, Paulo ;
Peterson, A. Townsend .
JOURNAL FOR NATURE CONSERVATION, 2009, 17 (01) :25-32
[9]   On the choice of statistical models for estimating occurrence and extinction from animal surveys [J].
Dorazio, Robert M. .
ECOLOGY, 2007, 88 (11) :2773-2782
[10]   Accounting for imperfect detection and survey bias in statistical analysis of presence-only data [J].
Dorazio, Robert M. .
GLOBAL ECOLOGY AND BIOGEOGRAPHY, 2014, 23 (12) :1472-1484