Threshold for shattering fragmentation in collision-induced dissociation of the doubly protonated tripeptide TIK(H+)2

被引:15
|
作者
Macaluso, Veronica [1 ]
Homayoon, Zahra [2 ]
Spezia, Riccardo [1 ,3 ]
Hase, William L. [2 ]
机构
[1] Univ Paris Saclay, Univ Evry, CNRS, LAMBE,CEA, F-91025 Evry, France
[2] Texas Tech Univ, Dept Chem & Biochem, Lubbock, TX 79409 USA
[3] Sorbonne Univ, CNRS, LCT, 4 Pl Jussieu, F-75252 Paris 05, France
基金
美国国家科学基金会;
关键词
CHEMICAL-DYNAMICS SIMULATIONS; SURFACE-INDUCED DISSOCIATION; CLASSICAL TRAJECTORY SIMULATIONS; POTENTIAL-ENERGY SURFACE; PEPTIDE IONS; ORGANIC-SURFACES; MECHANISMS; ACTIVATION; GLYCINE; URACIL;
D O I
10.1039/c8cp02577k
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
In a recent direct dynamics simulations of the collision induced dissociation (CID) of the doubly protonated tripeptide threonine-isoleucine-lysine and threonine-leucine-lysine ions, TIK(H+)(2) and TLK(H+)(2), a shattering fragmentation mechanism was found, in which the ion fragmented upon impact with N-2 (Z. Homayoon et al., Phys. Chem. Chem. Phys., 2018, 20, 3614). In using models to interpret experiments of biological ion CID, it is important to know the collision energy threshold for the shattering mechanism. In the work presented here, direct dynamics simulations were performed to study shattering fragmentation versus the collision energy (E-rel) for N-2 + TIK(H+)(2). From the probability of shattering fragmentation and the minimum energy transfer for fragmentation versus E-rel, a threshold of approximate to 55 kcal mol(-1) was identified for N-2 + TIK(H+)(2) shattering fragmentation. This threshold is substantially higher than the lowest activation energy of 14.7 kcal mol(-1), found from direct dynamics simulations, for the thermal dissociation of TIK(H+)(2).
引用
收藏
页码:19744 / 19749
页数:6
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