Greenlip Abalone (Haliotis laevigata) Genome and Protein Analysis Provides Insights into Maturation and Spawning

被引:16
作者
Botwright, Natasha A. [1 ]
Zhao, Min [2 ]
Wang, Tianfang [2 ]
McWilliam, Sean [1 ]
Colgrave, Michelle L. [1 ]
Hlinka, Ondrej [3 ]
Li, Sean [4 ]
Suwansa-ard, Saowaros [2 ]
Subramanian, Sankar [2 ]
McPherson, Luke [5 ]
King, Harry [6 ]
Reverter, Antonio [1 ]
Cook, Mathew T. [1 ]
McGrath, Annette [7 ]
Elliott, Nicholas G. [6 ]
Cummins, Scott F. [2 ]
机构
[1] CSIRO Agr & Food, Aquaculture, 306 Carmody Rd, St Lucia, Qld 4067, Australia
[2] Univ Sunshine Coast, Genecol Res Ctr, Sch Sci & Educ, Maroochydore, Qld 4558, Australia
[3] CSIRO Informat Management & Technol, Pullenvale, Qld 4069, Australia
[4] CSIRO, Data61, Acton, ACT 2601, Australia
[5] Jade Tiger Abalone, Indented Head, Vic 3223, Australia
[6] CSIRO Agr & Food, Aquaculture, Hobart, Tas 7000, Australia
[7] CSIRO, Data61, Dutton Pk, Qld 4101, Australia
基金
澳大利亚研究理事会;
关键词
abalone; Haliotis laevigata; genome; maturation; spawning; HIDDEN MARKOV MODEL; PHYLOGENETIC ANALYSIS; MAXIMUM-LIKELIHOOD; SIGNAL PEPTIDES; PREDICTION; NEUROPEPTIDES; ENVIRONMENT; ANNOTATION; EXPRESSION; GROWTH;
D O I
10.1534/g3.119.400388
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Wild abalone (Family Haliotidae) populations have been severely affected by commercial fishing, poaching, anthropogenic pollution, environment and climate changes. These issues have stimulated an increase in aquaculture production; however production growth has been slow due to a lack of genetic knowledge and resources. We have sequenced a draft genome for the commercially important temperate Australian 'greenlip' abalone (Haliotis laevigata, Donovan 1808) and generated 11 tissue transcriptomes from a female adult abalone. Phylogenetic analysis of the greenlip abalone with reference to the Pacific abalone (Haliotis discus hannai) indicates that these abalone species diverged approximately 71 million years ago. This study presents an in-depth analysis into the features of reproductive dysfunction, where we provide the putative biochemical messenger components (neuropeptides) that may regulate reproduction including gonad maturation and spawning. Indeed, we isolate the egg-laying hormone neuropeptide and under trial conditions induce spawning at 80% efficiency. Altogether, we provide a solid platform for further studies aimed at stimulating advances in abalone aquaculture production. The H. laevigata genome and resources are made available to the public on the abalone 'omics website, http://abalonedb.org.
引用
收藏
页码:3067 / 3078
页数:12
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