Forster energy transfer from nonexponentially decaying donors

被引:5
作者
Czuper, Agnieszka
Gryczynski, Ignacy
Kusba, Jozef
机构
[1] Gdansk Univ Technol, Fac Appl Phys & Math, PL-80952 Gdansk, Poland
[2] Univ N Texas, Hlth Sci Ctr, Dept Cell Biol & Genet, Ft Worth, TX 76107 USA
关键词
resonance energy transfer; transfer rate; nonexponential fluorescence decay;
D O I
10.1016/j.jphotobiol.2007.04.003
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Necessary modifications to the expression for the Forster energy transfer rate are discussed when fluorescence decay of the donor in the absence of acceptor is nonexponential. Discrete and continuous models of the nonexponentiality are taken into account. No general solution of the problem is found. It is, however, suggested that in many of the biochemical problems the most appropriate modification of the transfer rate can be that which is based on the assumption of the same constant value of the radiative decay rate for all donor molecules. The effect of the assumed form of the Forster energy transfer rate on the recovered values of the distance distribution and dynamics parameters of some exemplary bichromophoric systems is examined. (c) 2007 Elsevier B.V. All rights reserved.
引用
收藏
页码:200 / 208
页数:9
相关论文
共 43 条
[21]   DISTANCE DISTRIBUTIONS IN PROTEINS RECOVERED BY USING FREQUENCY-DOMAIN FLUOROMETRY - APPLICATIONS TO TROPONIN-I AND ITS COMPLEX WITH TROPONIN-C [J].
LAKOWICZ, JR ;
GRYCZYNSKI, I ;
CHEUNG, HC ;
WANG, CK ;
JOHNSON, ML ;
JOSHI, N .
BIOCHEMISTRY, 1988, 27 (26) :9149-9160
[22]   END-TO-END DISTANCE DISTRIBUTIONS OF FLEXIBLE MOLECULES - FREQUENCY-DOMAIN FLUORESCENCE ENERGY-TRANSFER MEASUREMENTS AND ROTATIONAL ISOMERIC STATE MODEL-CALCULATIONS [J].
LAKOWICZ, JR ;
WICZK, W ;
GRYCZYNSKI, I ;
FISHMAN, M ;
JOHNSON, ML .
MACROMOLECULES, 1993, 26 (02) :349-363
[23]   DISTANCE DISTRIBUTIONS IN NATIVE AND RANDOM-COIL TROPONIN-I FROM FREQUENCY-DOMAIN MEASUREMENTS OF FLUORESCENCE ENERGY-TRANSFER [J].
LAKOWICZ, JR ;
GRYCZYNSKI, I ;
CHEUNG, HC ;
WANG, CK ;
JOHNSON, ML .
BIOPOLYMERS, 1988, 27 (05) :821-830
[24]   Real-time measurement of multiple intramolecular distances during protein folding reactions: A multisite stopped-flow fluorescence energy-transfer study of yeast phosphoglycerate kinase [J].
Lillo, MP ;
Szpikowska, BK ;
Mas, MT ;
Sutin, JD ;
Beechem, JM .
BIOCHEMISTRY, 1997, 36 (37) :11273-11281
[25]   Effects of metallic silver particles on resonance energy transfer in labeled bovine serum albumin [J].
Malicka, J ;
Gryczynski, I ;
Kusba, J ;
Shen, YB ;
Lakowicz, JR .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2002, 294 (04) :886-892
[26]   FLUORESCENCE STUDY OF CONFORMATIONAL FLEXIBILITY OF RNASE S-PEPTIDE - DISTANCE-DISTRIBUTION, END-TO-END DIFFUSION, AND ANISOTROPY DECAYS [J].
MALIWAL, BP ;
LAKOWICZ, JR ;
KUPRYSZEWSKI, G ;
REKOWSKI, P .
BIOCHEMISTRY, 1993, 32 (46) :12337-12345
[27]   DONOR-ACCEPTOR DISTANCE DISTRIBUTIONS IN A DOUBLE-LABELED FLUORESCENT OLIGONUCLEOTIDE BOTH AS A SINGLE-STRAND AND IN DUPLEXES [J].
PARKHURST, KM ;
PARKHURST, LJ .
BIOCHEMISTRY, 1995, 34 (01) :293-300
[28]   EFFECT OF SURFACE PLASMONS ON TRANSITIONS IN MOLECULES [J].
PHILPOTT, MR .
JOURNAL OF CHEMICAL PHYSICS, 1975, 62 (05) :1812-1817
[29]   Long-range resonance energy transfer in molecular systems [J].
Scholes, GD .
ANNUAL REVIEW OF PHYSICAL CHEMISTRY, 2003, 54 :57-87
[30]   The renaissance of fluorescence resonance energy transfer [J].
Selvin, PR .
NATURE STRUCTURAL BIOLOGY, 2000, 7 (09) :730-734