Characterization of the complete chloroplast genome of Salix gordejevii (Salicaceae)

被引:3
|
作者
Wei, Yinghao [1 ,2 ]
Li, Xiaoping [1 ,2 ,3 ]
机构
[1] Key Lab Forest Tree Genet & Breeding & High Effic, Nanjing, Peoples R China
[2] Nanjing Forestry Univ, Coll Forestry, Nanjing, Peoples R China
[3] Poplar Germplasm Resource Nursery Jiangsu Prov, Nanjing, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2021年 / 6卷 / 09期
关键词
Chloroplast genome; Salix gordejevii; Salicaceae; Phylogenetic tree;
D O I
10.1080/23802359.2021.1959438
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Salix gordejevii is an endemic species in northern China. The analysis of the complete chloroplast genome of S. gordejevii can offer a referential basis for identifying and utilizing Salix germplasm resources. In this study, we obtained chloroplast DNA from S. gordejevii and characterized it. The complete chloroplast genome of S. gordejevii is 155,491 bp in length, comprising a pair of inverted repeats (IR, 27,408 bp), a large single-copy region (LSC, 84,367 bp), and a small single-copy region (SSC, 16,309 bp). We annotated 117 genes in total, including 80 protein-coding genes, 32 tRNA genes, four rRNA genes, and one pseudogene (ycf1). A maximum-likelihood phylogenetic tree was built with MEGA-X and showed that the chloroplast of S. gordejevii has the closest relationship with that of S. magnifica compared to the other reported Salix genomes.
引用
收藏
页码:2510 / 2512
页数:2
相关论文
共 50 条
  • [1] Characterization of the complete chloroplast genome of Salix variegata (Salicaceae)
    Chen, Juan
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 196 - 197
  • [2] Characterization of the complete chloroplast genome of Salix maizhokunggarensis (Salicaceae)
    Ma, Rui
    Zhou, Mijuan
    Wang, Yujie
    Zhu, Guoyu
    Li, Junyi
    Feng, Qiuhong
    Miao, Ning
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 1054 - 1055
  • [3] Characterization of the complete chloroplast genome of Salix koreensis Anderss (Salicaceae) 1868
    Wu, Jintai
    Li, Xiaoping
    MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (06): : 1131 - 1133
  • [4] Complete chloroplast genome sequence of Salix sinopurpurea (Salicaceae)
    Guo, Feiyi
    Liu, Kangjia
    Wang, Yachao
    Li, Enze
    Zhan, Zhenfeng
    Zhang, Zhixiang
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (03): : 718 - 719
  • [5] The complete chloroplast genome sequence of Salix viminalis (Salicaceae)
    Hu, Hua-Lei
    Lin, Hao
    Chen, Xu-Hui
    Liu, Yan-Qun
    Qin, Li
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3035 - 3036
  • [6] Structure and features of the complete chloroplast genome of Salix triandroides (Salicaceae)
    Zhou, Xiaoxing
    Sheng, Shihong
    Xu, Qi
    Lu, Rihui
    Chen, Chuan
    Peng, Huiming
    Feng, Chen
    BIOTECHNOLOGY & BIOTECHNOLOGICAL EQUIPMENT, 2022, 36 (01) : 148 - 158
  • [7] The complete chloroplast genome of Salix lindleyana (salicaceae), a plateau plant species
    Xu, Nan
    Du, Xin
    Zhang, Xiu-Xing
    Yang, Hai-Ling
    MITOCHONDRIAL DNA PART B-RESOURCES, 2023, 8 (08): : 877 - 881
  • [8] Characterization of the complete chloroplast genome of Salix chienii WC Cheng (Salicaceae) from Southern China
    Wang, Weiyu
    Li, Xiaoping
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (10): : 3087 - 3088
  • [9] Complete chloroplast genome sequence of the Salix koriyanagi Kimura ex Goerz (Salicaceae)
    Kim, Juhyeon
    Kim, Yongsung
    Park, Jongsun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 549 - 550
  • [10] Characterization of the complete chloroplast genome and development of molecular markers of Salix
    Wang, Pu
    Guo, Jiahui
    Zhou, Jie
    Wang, Yixuan
    SCIENTIFIC REPORTS, 2024, 14 (01):