Synthesis of uniformly deuterated n-dodecyl-β-D-maltoside (d39-DDM) for solubilization of membrane proteins in TROSY NMR experiments

被引:8
|
作者
Hiruma-Shimizu, Kazumi [1 ,3 ,4 ]
Kalverda, Arnout P. [1 ,3 ]
Henderson, Peter J. F. [2 ,3 ]
Homans, Steve W. [1 ,3 ,5 ]
Patching, Simon G. [6 ]
机构
[1] Univ Leeds, Sch Mol & Cellular Biol, Leeds, W Yorkshire, England
[2] Univ Leeds, Sch Biomed Sci, Leeds, W Yorkshire, England
[3] Univ Leeds, Astbury Ctr Struct Mol Biol, Leeds, W Yorkshire, England
[4] Waseda Univ, Tokyo, Japan
[5] Newcastle Univ, Newcastle Upon Tyne NE1 7RU, Tyne & Wear, England
[6] Univ Leeds, Leeds, W Yorkshire, England
基金
英国生物技术与生命科学研究理事会; 英国工程与自然科学研究理事会;
关键词
detergent; deuteration; n-dodecyl--d-maltoside; membrane proteins; NMR; NUCLEAR-MAGNETIC-RESONANCE; ALKYL GLYCOSIDE DETERGENTS; CYTOCHROME-C-OXIDASE; NEUTRON REFLECTION; SPECTROSCOPY; ALPHA; BACTERIORHODOPSIN; MICELLES; MODEL;
D O I
10.1002/jlcr.3249
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
This work reports the first synthesis of uniformly deuterated n-dodecyl--d-maltoside (d(39)-DDM). DDM is a mild non-ionic detergent often used in the extraction and purification of membrane proteins and for solubilizing them in experimental studies of their structure, dynamics and binding of ligands. We required d(39)-DDM for solubilizing large -helical membrane proteins in samples for [N-15-H-1]TROSY (transverse relaxation-optimized spectroscopy) NMR experiments to achieve the highest sensitivity and best resolved spectra possible. Our synthesis of d(39)-DDM used d(7)-d-glucose and d(25)-n-dodecanol to introduce deuterium labelling into both the maltoside and dodecyl moieties, respectively. Two glucose molecules, one converted to a glycosyl acceptor with a free C4 hydroxyl group and one converted to a glycosyl donor substituted at C1 with a bromine in the -configuration, were coupled together with an (14) glycosidic bond to give maltose, which was then coupled with n-dodecanol by its substitution of a C1 bromine in the -configuration to give DDM. H-1 NMR spectra were used to confirm a high level of deuteration in the synthesized d(39)-DDM and to demonstrate its use in eliminating interfering signals from TROSY NMR spectra of a 52-kDa sugar transport protein solubilized in DDM.
引用
收藏
页码:737 / 743
页数:7
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