Genome-wide Association Mapping Identifies a New Arsenate Reductase Enzyme Critical for Limiting Arsenic Accumulation in Plants

被引:199
作者
Chao, Dai-Yin [1 ,2 ]
Chen, Yi [3 ]
Chen, Jiugeng [1 ]
Shi, Shulin [4 ]
Chen, Ziru [1 ,5 ]
Wang, Chengcheng [4 ]
Danku, John M. [2 ]
Zhao, Fang-Jie [4 ,6 ]
Salt, David E. [2 ]
机构
[1] Chinese Acad Sci, Shanghai Inst Biol Sci, Inst Plant Physiol & Ecol, NKLPMG, Shanghai, Peoples R China
[2] Univ Aberdeen, Inst Biol & Environm Sci, Aberdeen, Scotland
[3] Rothamsted Res, Sustainable Soils & Grassland Syst Dept, Harpenden, Herts, England
[4] Nanjing Agr Univ, Coll Resources & Environm Sci, State Key Lab Crop Genet & Germplasm Enhancement, Nanjing, Jiangsu, Peoples R China
[5] Univ Chinese Acad Sci, Beijing, Peoples R China
[6] Rothamsted Res, Harpenden, Herts, England
基金
美国国家卫生研究院; 英国生物技术与生命科学研究理事会;
关键词
ARABIDOPSIS-THALIANA; NATURAL VARIATION; GENETIC ARCHITECTURE; RICE CONSUMPTION; ARSC PROTEIN; ADAPTATION; TOLERANCE; SCALE; LEAF; TRANSLOCATION;
D O I
10.1371/journal.pbio.1002009
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Inorganic arsenic is a carcinogen, and its ingestion through foods such as rice presents a significant risk to human health. Plants chemically reduce arsenate to arsenite. Using genome-wide association (GWA) mapping of loci controlling natural variation in arsenic accumulation in Arabidopsis thaliana allowed us to identify the arsenate reductase required for this reduction, which we named High Arsenic Content 1 (HAC1). Complementation verified the identity of HAC1, and expression in Escherichia coli lacking a functional arsenate reductase confirmed the arsenate reductase activity of HAC1. The HAC1 protein accumulates in the epidermis, the outer cell layer of the root, and also in the pericycle cells surrounding the central vascular tissue. Plants lacking HAC1 lose their ability to efflux arsenite from roots, leading to both increased transport of arsenic into the central vascular tissue and on into the shoot. HAC1 therefore functions to reduce arsenate to arsenite in the outer cell layer of the root, facilitating efflux of arsenic as arsenite back into the soil to limit both its accumulation in the root and transport to the shoot. Arsenate reduction by HAC1 in the pericycle may play a role in limiting arsenic loading into the xylem. Loss of HAC1-encoded arsenic reduction leads to a significant increase in arsenic accumulation in shoots, causing an increased sensitivity to arsenate toxicity. We also confirmed the previous observation that the ACR2 arsenate reductase in A. thaliana plays no detectable role in arsenic metabolism. Furthermore, ACR2 does not interact epistatically with HAC1, since arsenic metabolism in the acr2 hac1 double mutant is disrupted in an identical manner to that described for the hac1 single mutant. Our identification of HAC1 and its associated natural variation provides an important new resource for the development of low arsenic-containing food such as rice.
引用
收藏
页数:17
相关论文
共 87 条
[1]   Genetic mapping of adaptation reveals fitness tradeoffs in Arabidopsis thaliana [J].
Agren, Jon ;
Oakley, Christopher G. ;
McKay, John K. ;
Lovell, John T. ;
Schemske, Douglas W. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2013, 110 (52) :21077-21082
[2]   Genome-Wide Analysis of Branched-Chain Amino Acid Levels in Arabidopsis Seeds [J].
Angelovici, Ruthie ;
Lipka, Alexander E. ;
Deason, Nicholas ;
Gonzalez-Jorge, Sabrina ;
Lin, Haining ;
Cepela, Jason ;
Buell, Robin ;
Gore, Michael A. ;
DellaPenna, Dean .
PLANT CELL, 2013, 25 (12) :4827-4843
[3]   Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines [J].
Atwell, Susanna ;
Huang, Yu S. ;
Vilhjalmsson, Bjarni J. ;
Willems, Glenda ;
Horton, Matthew ;
Li, Yan ;
Meng, Dazhe ;
Platt, Alexander ;
Tarone, Aaron M. ;
Hu, Tina T. ;
Jiang, Rong ;
Muliyati, N. Wayan ;
Zhang, Xu ;
Amer, Muhammad Ali ;
Baxter, Ivan ;
Brachi, Benjamin ;
Chory, Joanne ;
Dean, Caroline ;
Debieu, Marilyne ;
de Meaux, Juliette ;
Ecker, Joseph R. ;
Faure, Nathalie ;
Kniskern, Joel M. ;
Jones, Jonathan D. G. ;
Michael, Todd ;
Nemri, Adnane ;
Roux, Fabrice ;
Salt, David E. ;
Tang, Chunlao ;
Todesco, Marco ;
Traw, M. Brian ;
Weigel, Detlef ;
Marjoram, Paul ;
Borevitz, Justin O. ;
Bergelson, Joy ;
Nordborg, Magnus .
NATURE, 2010, 465 (7298) :627-631
[4]   Purdue Ionomics Information Management System. An integrated functional genomics platform [J].
Baxter, Ivan ;
Ouzzani, Mourad ;
Orcun, Seza ;
Kennedy, Brad ;
Jandhyala, Shrinivas S. ;
Salt, David E. .
PLANT PHYSIOLOGY, 2007, 143 (02) :600-611
[5]   Biodiversity of Mineral Nutrient and Trace Element Accumulation in Arabidopsis thaliana [J].
Baxter, Ivan ;
Hermans, Christian ;
Lahner, Brett ;
Yakubova, Elena ;
Tikhonova, Marina ;
Verbruggen, Nathalie ;
Chao, Dai-yin ;
Salt, David E. .
PLOS ONE, 2012, 7 (04)
[6]   A Coastal Cline in Sodium Accumulation in Arabidopsis thaliana Is Driven by Natural Variation of the Sodium Transporter AtHKT1;1 [J].
Baxter, Ivan ;
Brazelton, Jessica N. ;
Yu, Danni ;
Huang, Yu S. ;
Lahner, Brett ;
Yakubova, Elena ;
Li, Yan ;
Bergelson, Joy ;
Borevitz, Justin O. ;
Nordborg, Magnus ;
Vitek, Olga ;
Salt, David E. .
PLOS GENETICS, 2010, 6 (11)
[7]   Bulk Segregant Analysis Using Single Nucleotide Polymorphism Microarrays [J].
Becker, Anthony ;
Chao, Dai-Yin ;
Zhang, Xu ;
Salt, David E. ;
Baxter, Ivan .
PLOS ONE, 2011, 6 (01)
[8]   Enhanced arsenate reduction by a CDC25-like tyrosine phosphatase explains increased phytochelatin accumulation in arsenate-tolerant Holcus lanatus [J].
Bleeker, PM ;
Hakvoort, HWJ ;
Bliek, M ;
Souer, E ;
Schat, H .
PLANT JOURNAL, 2006, 45 (06) :917-929
[9]   The rhodanese/Cdc25 phosphatase superfamily - Sequence-structure-function relations [J].
Bordo, D ;
Bork, P .
EMBO REPORTS, 2002, 3 (08) :741-746
[10]   Large-scale identification of single-feature polymorphisms in complex genomes [J].
Borevitz, JO ;
Liang, D ;
Plouffe, D ;
Chang, HS ;
Zhu, T ;
Weigel, D ;
Berry, CC ;
Winzeler, E ;
Chory, J .
GENOME RESEARCH, 2003, 13 (03) :513-523