Development of an effective method of human DNA extraction from soil as forensic evidence

被引:1
作者
Hirashima, Hiroko [1 ,3 ]
Hisazumi, Rinnosuke [3 ]
Mason, Maria Luisa T. [4 ]
Yamamoto, Akihiro [2 ]
Saeki, Yuichi [2 ]
机构
[1] Univ Miyazaki, Interdisciplinary Grad Sch Agr & Engn, Miyazaki 8892192, Japan
[2] Univ Miyazaki, Fac Agr, Miyazaki 8892192, Japan
[3] Miyazaki Prefectural Police HQ, Miyazaki Prefectural Police Forens Sci Lab, Miyazaki 8808509, Japan
[4] Cent Luzon State Univ, Coll Agr, Nueva Ecija, Philippines
关键词
Forensic science; DNA typing; DNA extraction; Soil; Skim milk; BSA; PCR;
D O I
10.1016/j.forsciint.2022.111284
中图分类号
DF [法律]; D9 [法律]; R [医药、卫生];
学科分类号
0301 ; 10 ;
摘要
In forensic investigations, it is crucial to detect a suspect's DNA from the available evidence. In an outdoor crime scene, the evidence may be mixed with the soil. However, soil is speculated to inhibit DNA extraction from forensic science samples. In the field of soil microbiology, it is necessary to extract DNA directly from soil to analyse its microbial composition. In this study, we investigated whether skim milk used in procedure of DNA extraction from soil samples could be applied to forensic science to enhance human DNA extraction efficiency from soil mixed with forensic evidence, such as blood, buccal cells, and skin cells. The use of additive reagents, skim milk and bovine serum albumin (BSA), are known to blocking reagent. In the selection of additive reagents experiment, about blood sample, using the skim milk and BSA were found to increase the DNA yield. Therefore, we observed extracted DNA yield from blood, buccal cells, and skin cells when skim milk and BSA were used as additive reagents. The DNA recovery rate was high across all samples upon addition of skim milk. However, in STR analysis, a non-specific peak was detected in the extracted DNA in the presence of skim milk, which was not detected in the presence of BSA, indicating its suitability in forensic analysis. Our study suggests that addition of BSA can efficiently aid the extraction of DNA from forensic evidence mixed with soil.
引用
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页数:7
相关论文
共 23 条
[1]  
[Anonymous], 2015, Appl Biosyst Life Technol, VF, P1
[2]  
Applied BiosystemsTM, 2016, GLOBALFILERTM PCR AM, P1
[3]   A comparative study of different laboratory storage conditions for enhanced DNA analysis of crime scene soil-blood mixed sample [J].
Badu-Boateng, Alexander ;
Twumasi, Peter ;
Salifu, Samson Pandam ;
Afrifah, Kofi Adjapong .
FORENSIC SCIENCE INTERNATIONAL, 2018, 292 :97-109
[4]   DNA extraction from soil by EZ1 advanced XL (Qiagen) [J].
Barbaro, A. ;
Cormaci, P. ;
La Marca, A. .
FORENSIC SCIENCE INTERNATIONAL, 2019, 299 :161-167
[5]   Extraction platform evaluations: A comparison of Automate Express™, EZ1® Advanced XL, and Maxwell® 16 Bench-top DNA extraction systems [J].
Davis, Carey P. ;
King, Jonathan L. ;
Budowle, Bruce ;
Eisenberg, Arthur J. ;
Turnbough, Meredith A. .
LEGAL MEDICINE, 2012, 14 (01) :36-39
[6]   PCR inhibitor removal using the NucleoSpin® DNA Clean-Up XS kit [J].
Faber, Korie L. ;
Person, Eric C. ;
Hudlow, William R. .
FORENSIC SCIENCE INTERNATIONAL-GENETICS, 2013, 7 (01) :209-213
[7]  
Frostegård Å, 1999, APPL ENVIRON MICROB, V65, P5409
[8]   Improved Protocol for DNA Extraction from Subsoils Using Phosphate Lysis Buffer [J].
Guerra, Victor ;
Beule, Lukas ;
Lehtsaar, Ena ;
Liao, Hui-Ling ;
Karlovsky, Petr .
MICROORGANISMS, 2020, 8 (04)
[9]  
Hoshino Y.T., 2004, MICROBES ENVIRON, V19, P13, DOI DOI 10.1264/JSME2.19.13
[10]  
Hoshino YT, 2005, JARQ-JPN AGR RES Q, V39, P247