Mid- and near-infrared spectra of conformers of H-Pro-Trp-OH

被引:32
作者
Haeber, Thomas [1 ]
Seefeld, Kai [1 ]
Kleinermanns, Karl [1 ]
机构
[1] Univ Dusseldorf, Inst Phys Chem, D-40225 Dusseldorf, Germany
关键词
D O I
10.1021/jp070571e
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We present near- and mid-infrared-UV double resonance spectra of the natural dipeptide H-Pro-Trp-OH. Two conformers are present in the supersonic expansion: a stretched conformer with fully extended backbone and a folded conformer with an OH center dot center dot center dot OCpep hydrogen bond. Both conformers are stabilized by dispersion interaction between indole ring and peptide backbone and a NHpep/N-proline contact. The vibrational and conformational assignment is supported by DFT and MP2 calculations. An adequate description of the energetic order of different conformers requires the explicit inclusion of dispersion and geometry optimization at the MP2 level. We will address the very sensitivity of the observed conformations to the structure of the end groups.
引用
收藏
页码:3038 / 3046
页数:9
相关论文
共 63 条
[31]  
Guruprasad K, 2000, CURR SCI INDIA, V79, P992
[32]   Analysis of γβ, βγ, γγ, ββ multiple turns in proteins [J].
Guruprasad, K ;
Prasad, MS ;
Kumar, GR .
JOURNAL OF PEPTIDE RESEARCH, 2000, 56 (04) :250-263
[33]   Conformers of the peptides glycine-tryptophan, tryptophan-glycine and tryptophan-glycine-glycine as revealed by double resonance laser spectroscopy [J].
Hünig, I ;
Kleinermanns, K .
PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2004, 6 (10) :2650-2658
[34]   REMPI and UV-UV double resonance spectroscopy of tryptophan ethylester and the dipeptides tryptophan-serine, glycine-tryptophan and proline-tryptophan [J].
Hünig, I ;
Seefeld, KA ;
Kleinermanns, K .
CHEMICAL PHYSICS LETTERS, 2003, 369 (1-2) :173-179
[35]  
Imhof P, 1999, CHEM PHYS, V242, P153, DOI 10.1016/S0301-0104(99)00015-4
[36]   Amino acids and small peptides as building blocks for proteins: comparative theoretical and spectroscopic studies [J].
Jalkanen, KJ ;
Elstner, M ;
Suhai, S .
JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 2004, 675 (1-3) :61-77
[37]   Structure and vibrations of phenol (H2O)7,8 studied by infrared-ultraviolet and ultraviolet-ultraviolet double-resonance spectroscopy and ab initio theory [J].
Janzen, C ;
Spangenberg, D ;
Roth, W ;
Kleinermanns, K .
JOURNAL OF CHEMICAL PHYSICS, 1999, 110 (20) :9898-9907
[38]   Alanyl side chain folding in phenylalanine: Conformational assignments through ultraviolet rotational band contour analysis [J].
Lee, YH ;
Jung, JW ;
Kim, B ;
Butz, P ;
Snoek, LC ;
Kroemer, RT ;
Simons, JP .
JOURNAL OF PHYSICAL CHEMISTRY A, 2004, 108 (01) :69-73
[39]  
Lovell SC, 2000, PROTEINS, V40, P389, DOI 10.1002/1097-0134(20000815)40:3<389::AID-PROT50>3.0.CO
[40]  
2-2