Nonlinear analysis of sequence repeats of multi-domain proteins

被引：8
|
作者：
Huang, Yanzhao [1 ]
Li, Mingfeng [1 ]
Xiao, Yi [1 ]
机构：
[1] Huazhong Univ Sci & Technol, Dept Phys, Biomol Phys & Modeling Grp, Wuhan 430074, Peoples R China
来源：
CHAOS SOLITONS & FRACTALS | 2007年 / 34卷 / 03期
基金：
中国国家自然科学基金;
关键词：
D O I：
10.1016/j.chaos.2006.03.080
中图分类号：
O1 [数学];
学科分类号：
0701 ; 070101 ;
摘要：
Many multi-domain proteins have repetitive three-dimensional structures but nearly-random amino acid sequences. In the present paper, by using a modified recurrence plot proposed by us previously, we show that these amino acid sequences have hidden repetitions in fact. These results indicate that the repetitive domain structures are encoded by the repetitive sequences. This also gives a method to detect the repetitive domain structures directly from amino acid sequences. (C) 2006 Elsevier Ltd. All rights reserved.
引用
收藏
页码：782 / 786
页数：5
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