Hydrogen-bond lengths in polypeptide helices: No evidence for short hydrogen bonds

被引:24
|
作者
Aravinda, S [1 ]
Datta, S
Shamala, N
Balaram, P
机构
[1] Indian Inst Sci, Mol Biophys Unit, Bangalore 560012, Karnataka, India
[2] Indian Inst Sci, Dept Phys, Bangalore 560012, Karnataka, India
关键词
circular dichroism; helical structures; hydrogen bonds; peptides; structure elucidation;
D O I
10.1002/anie.200461127
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The long and the short of it: N⋯O distances less than 2.8 Å (see picture) have been implicated in determining the 220 nm circular dichroism band intensity in helical peptides. An analysis of helical peptide crystal structures, however, reveals the average experimentally determined hydrogen-bond lengths are 2.978-3.113 Å (α helix) and 2.907-3.211 Å (3 10 helix).
引用
收藏
页码:6728 / 6731
页数:4
相关论文
共 50 条
  • [1] An optimal hydrogen-bond surrogate for α-helices
    Joy, Stephen T.
    Arora, Paramjit S.
    CHEMICAL COMMUNICATIONS, 2016, 52 (33) : 5738 - 5741
  • [2] EVALUATION OF BOND LENGTHS OF HYDROGEN BONDS
    ROY, RS
    JOURNAL OF THE INDIAN CHEMICAL SOCIETY, 1969, 46 (08) : 739 - &
  • [3] Hydrogen-Bond Networks: Strengths of Different Types of Hydrogen Bonds and An Alternative to the Low Barrier Hydrogen-Bond Proposal
    Shokri, Alireza
    Wang, Yanping
    O'Doherty, George A.
    Wang, Xue-Bin
    Kass, Steven R.
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2013, 135 (47) : 17919 - 17924
  • [4] Hydrogen-bond kinetics in the solvation shell of a polypeptide
    Xu, HF
    Berne, BJ
    JOURNAL OF PHYSICAL CHEMISTRY B, 2001, 105 (48): : 11929 - 11932
  • [5] Estimation on the individual hydrogen-bond strength in molecules with multiple hydrogen bonds
    Dong, Hao
    Hua, Weijie
    Li, Shuhua
    JOURNAL OF PHYSICAL CHEMISTRY A, 2007, 111 (15): : 2941 - 2945
  • [6] Nucleation and stability of hydrogen-bond surrogate-based α-helices
    Wang, Deyun
    Chen, Kang
    Dimartino, Gianluca
    Arora, Paramjit S.
    ORGANIC & BIOMOLECULAR CHEMISTRY, 2006, 4 (22) : 4074 - 4081
  • [7] "Hydridic Hydrogen-Bond Donors" Are Not Hydrogen-Bond Donors
    Santos, Lucas de Azevedo
    Vermeeren, Pascal
    Bickelhaupt, F. Matthias
    Guerra, Celia Fonseca
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2024, 146 (37) : 25701 - 25709
  • [8] Evaluation of biologically relevant short α-helices stabilized by a main-chain hydrogen-bond surrogate
    Wang, Deyun
    Chen, Kang
    Kulp III, John L.
    Arora, Paramjit S.
    Journal of the American Chemical Society, 2006, 128 (28): : 9248 - 9256
  • [9] Evaluation of biologically relevant short α-helices stabilized by a main-chain hydrogen-bond surrogate
    Wang, Deyun
    Chen, Kang
    Kulp, John L., III
    Arora, Paramjit S.
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2006, 128 (28) : 9248 - 9256
  • [10] THE HYDROGEN-BOND
    MARECHAL, Y
    RECHERCHE, 1989, 20 (209): : 480 - 489