DNA microarrays in clinical cancer research

被引:32
作者
Wadlow, R
Ramaswamy, S
机构
[1] Massachusetts Gen Hosp, Ctr Canc, Boston, MA 02129 USA
[2] Harvard Univ, Sch Med, Boston, MA USA
关键词
D O I
10.2174/1566524053152834
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
The recent sequencing of the human genome, coupled with advances in biotechnology, is enabling the comprehensive molecular "profiling" of human tissues. In particular, DNA microarrays are powerful tools for obtaining global views of human tumor gene expression. Complex information from tumor "expression profiling" studies can, in turn, be used to create novel molecular cancer diagnostics. We discuss the utility of DNA microarray-based tumor profiling in clinical cancer research, highlight some important recent studies, and identify future avenues of research in this evolving field.
引用
收藏
页码:111 / 120
页数:10
相关论文
共 31 条
[1]   The lymphochip: A specialized cDNA microarray for the genomic-scale analysis of gene expression in normal and malignant lymphocytes [J].
Alizadeh, A ;
Eisen, M ;
Davis, RE ;
Ma, C ;
Sabet, H ;
Tran, T ;
Powell, JI ;
Yang, L ;
Marti, GE ;
Moore, DT ;
Hudson, JR ;
Chan, WC ;
Greiner, T ;
Weisenburger, D ;
Armitage, JO ;
Lossos, I ;
Levy, R ;
Botstein, D ;
Brown, PO ;
Staudt, LM .
COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY, 1999, 64 :71-78
[2]   Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling [J].
Alizadeh, AA ;
Eisen, MB ;
Davis, RE ;
Ma, C ;
Lossos, IS ;
Rosenwald, A ;
Boldrick, JG ;
Sabet, H ;
Tran, T ;
Yu, X ;
Powell, JI ;
Yang, LM ;
Marti, GE ;
Moore, T ;
Hudson, J ;
Lu, LS ;
Lewis, DB ;
Tibshirani, R ;
Sherlock, G ;
Chan, WC ;
Greiner, TC ;
Weisenburger, DD ;
Armitage, JO ;
Warnke, R ;
Levy, R ;
Wilson, W ;
Grever, MR ;
Byrd, JC ;
Botstein, D ;
Brown, PO ;
Staudt, LM .
NATURE, 2000, 403 (6769) :503-511
[3]   Gene expression profiling for the prediction of therapeutic response to docetaxel in patients with breast cancer [J].
Chang, JC ;
Wooten, EC ;
Tsimelzon, A ;
Hilsenbeck, SG ;
Gutierrez, MC ;
Elledge, R ;
Mohsin, S ;
Osborne, CK ;
Chamness, GC ;
Allred, DC ;
O'Connell, P .
LANCET, 2003, 362 (9381) :362-369
[4]   Fundamentals of experimental design for cDNA microarrays [J].
Churchill, GA .
NATURE GENETICS, 2002, 32 (Suppl 4) :490-495
[5]   Polychemotherapy for early breast cancer: an overview of the randomised clinical trials with quality-adjusted survival analysis [J].
Cole, BF ;
Gelber, RD ;
Gelber, S ;
Coates, AS ;
Goldhirsch, A .
LANCET, 2001, 358 (9278) :277-286
[6]   Good Old clinical markers have similar power in breast cancer prognosis as microarray gene expression profilers [J].
Edén, P ;
Ritz, C ;
Rose, C ;
Fernö, M ;
Peterson, C .
EUROPEAN JOURNAL OF CANCER, 2004, 40 (12) :1837-1841
[7]   Cluster analysis and display of genome-wide expression patterns [J].
Eisen, MB ;
Spellman, PT ;
Brown, PO ;
Botstein, D .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (25) :14863-14868
[8]   Laser capture microdissection [J].
EmmertBuck, MR ;
Bonner, RF ;
Smith, PD ;
Chuaqui, RF ;
Zhuang, ZP ;
Goldstein, SR ;
Weiss, RA ;
Liotta, LA .
SCIENCE, 1996, 274 (5289) :998-1001
[9]   Data management and analysis for gene expression arrays [J].
Ermolaeva, O ;
Rastogi, M ;
Pruitt, KD ;
Schuler, GD ;
Bittner, ML ;
Chen, YD ;
Simon, R ;
Meltzer, P ;
Trent, JM ;
Boguski, MS .
NATURE GENETICS, 1998, 20 (01) :19-23
[10]   Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring [J].
Golub, TR ;
Slonim, DK ;
Tamayo, P ;
Huard, C ;
Gaasenbeek, M ;
Mesirov, JP ;
Coller, H ;
Loh, ML ;
Downing, JR ;
Caligiuri, MA ;
Bloomfield, CD ;
Lander, ES .
SCIENCE, 1999, 286 (5439) :531-537