Biosensor for label-free DNA quantification based on functionalized LPGs

被引:43
作者
Goncalves, Helena M. R. [1 ]
Moreira, Luis [1 ]
Pereira, Leonor [1 ,3 ]
Jorge, Pedro [2 ]
Gouveia, Carlos [2 ]
Martins-Lopes, Paula [1 ,3 ]
Fernandes, Jose R. A. [1 ,2 ]
机构
[1] Univ Tras Os Montes & Alto Douro, POB 1013, P-5000911 Vila Real, Portugal
[2] INESC TEC, Rua Campo Alegre 687, P-4169007 Oporto, Portugal
[3] Univ Lisbon, Fac Sci, BioISI Biosyst & Integrat Sci Inst, P-1699 Lisbon, Portugal
关键词
Biosensing; Label-free; Detection; Quantification; DNA; DIRECT ELECTROCHEMICAL SENSOR; GRATING SENSORS; FIBER; REAGENTLESS; RECOGNITION; GROWTH; ARC;
D O I
10.1016/j.bios.2015.10.001
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
A label-free fiber optic biosensor based on a long period grating (LPG) and a basic optical interrogation scheme using off the shelf components is used for the detection of in-situ DNA hybridization. A new methodology is proposed for the determination of the spectral position of the LPG mode resonance. The experimental limit of detection obtained for the DNA was 62 +/- 2 nM and the limit of quantification was 209 +/- 7 nM. The sample specificity was experimentally demonstrated using DNA targets with different base mismatches relatively to the probe and was found that the system has a single base mismatch selectivity. (C) 2015 Elsevier B.V. All rights reserved.
引用
收藏
页码:30 / 36
页数:7
相关论文
共 20 条
[1]   Geometrical effects on the refractive index sensitivity of Mach-Zehnder fibre modal interferometers based on long-period gratings [J].
Caldas, P. ;
Jorge, P. A. S. ;
Araujo, F. M. ;
Ferreira, L. A. ;
Rego, G. ;
Santos, J. L. .
MEASUREMENT SCIENCE AND TECHNOLOGY, 2009, 20 (07)
[2]   Evaluation of the new MB Redox system for detection of growth of mycobacteria [J].
Cambau, E ;
Wichlacz, C ;
Truffot-Pernot, C ;
Jarlier, V .
JOURNAL OF CLINICAL MICROBIOLOGY, 1999, 37 (06) :2013-2015
[3]   Development and testing of a rapid diagnostic test for bubonic and pneumonic plague [J].
Chanteau, S ;
Rahalison, L ;
Ralafiarisoa, L ;
Foulon, J ;
Ratsitorahina, M ;
Ratsifasoamanana, L ;
Carniel, E ;
Nato, A .
LANCET, 2003, 361 (9353) :211-216
[4]   Measured sensitivity of arc-induced long-period grating sensors in photonic crystal fibre [J].
Dobb, H ;
Kalli, K ;
Webb, DJ .
OPTICS COMMUNICATIONS, 2006, 260 (01) :184-191
[5]   A non-immobilizing electrochemical DNA sensing strategy with homogenous hybridization based on the host-guest recognition technique [J].
Fan, Hao ;
Xu, Ying ;
Chang, Zhu ;
Xing, Rong ;
Wang, Qingjiang ;
He, Pingang ;
Fang, Yuzhi .
BIOSENSORS & BIOELECTRONICS, 2011, 26 (05) :2655-2659
[6]   Direct electrochemical sensor for fast reagent-free DNA detection [J].
Komarova, E ;
Aldissi, M ;
Bogomolova, A .
BIOSENSORS & BIOELECTRONICS, 2005, 21 (01) :182-189
[7]   Rapid, sequence-specific detection of unpurified PCR amplicons via a reusable, electrochemical sensor [J].
Lai, RY ;
Lagally, ET ;
Lee, SH ;
Soh, HT ;
Plaxco, KW ;
Heeger, AJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (11) :4017-4021
[8]   Sequence-specific, electronic detection of oligonucleotides in blood, soil, and foodstuffs with the reagentless, reusable E-DNA sensor [J].
Lubin, Arica A. ;
Lai, Rebecca Y. ;
Baker, Brian R. ;
Heeger, Alan J. ;
Plaxco, Kevin W. .
ANALYTICAL CHEMISTRY, 2006, 78 (16) :5671-5677
[9]  
Murieta I.S., 2012, BIOSYSTEMS, V109, P91
[10]   Surface-attached molecular beacons light the way for DNA sequencing [J].
Palecek, E .
TRENDS IN BIOTECHNOLOGY, 2004, 22 (02) :55-58