A web portal of 'next-generation' clustered heat maps for user-friendly, interactive exploration of patterns in TCGA data

被引：0

作者：

Weinstein, John N. ^{[1
]}

Akbani, Rehan ^{[1
]}

Kane, David W. ^{[2
]}

Melott, James M. ^{[1
]}

Casasent, Tod D. ^{[1
]}

Yao, Rong ^{[1
]}

Roebuck, Paul L. ^{[1
]}

Mills, Gordon B. ^{[1
]}

Ryan, Michael C. ^{[3
]}

Wakefield, Christopher ^{[1
]}

Broom, Bradley M. ^{[1
]}

机构：

[1] Univ Texas MD Anderson Canc Ctr, Houston, TX 77030 USA

[2] Santeon Inc, Fairfax, VA USA

[3] Silico Solut, Fairfax, VA USA

来源：

CANCER RESEARCH | 2015年 / 75卷

关键词：

MOLECULAR PHARMACOLOGY; EXPRESSION PATTERNS; CANCER; DISCOVERY;

D O I：

10.1158/1538-7445.AM2015-2979

中图分类号：

R73 [肿瘤学];

学科分类号：

100214 ;

摘要：

2979

引用

页数：2

共 9 条

[1] Cluster analysis and display of genome-wide expression patterns [J].

Eisen, MB ;

Spellman, PT ;

Brown, PO ;

Botstein, D .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (25) :14863-14868

[2] Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring [J].

Golub, TR ;

Slonim, DK ;

Tamayo, P ;

Huard, C ;

Gaasenbeek, M ;

Mesirov, JP ;

Coller, H ;

Loh, ML ;

Downing, JR ;

Caligiuri, MA ;

Bloomfield, CD ;

Lander, ES .

SCIENCE, 1999, 286 (5439) :531-537

[3]

Myers TG, 1997, ELECTROPHORESIS, V18, P467

[4] Systematic variation in gene expression patterns in human cancer cell lines [J].

Ross, DT ;

Scherf, U ;

Eisen, MB ;

Perou, CM ;

Rees, C ;

Spellman, P ;

Iyer, V ;

Jeffrey, SS ;

Van de Rijn, M ;

Waltham, M ;

Pergamenschikov, A ;

Lee, JCE ;

Lashkari, D ;

Shalon, D ;

Myers, TG ;

Weinstein, JN ;

Botstein, D ;

Brown, PO .

NATURE GENETICS, 2000, 24 (03) :227-235

[5] A gene expression database for the molecular pharmacology of cancer [J].

Scherf, U ;

Ross, DT ;

Waltham, M ;

Smith, LH ;

Lee, JK ;

Tanabe, L ;

Kohn, KW ;

Reinhold, WC ;

Myers, TG ;

Andrews, DT ;

Scudiero, DA ;

Eisen, MB ;

Sausville, EA ;

Pommier, Y ;

Botstein, D ;

Brown, PO ;

Weinstein, JN .

NATURE GENETICS, 2000, 24 (03) :236-244

[6] PREDICTIVE STATISTICS AND ARTIFICIAL-INTELLIGENCE IN THE US-NATIONAL-CANCER-INSTITUTES-DRUG-DISCOVERY-PROGRAM-FOR-CANCER-AND-AIDS [J].

WEINSTEIN, JN ;

MYERS, T ;

BUOLAMWINI, J ;

RAGHAVAN, K ;

VANOSDOL, W ;

LICHT, J ;

VISWANADHAN, VN ;

KOHN, KW ;

RUBINSTEIN, LV ;

KOUTSOUKOS, AD ;

MONKS, A ;

SCUDIERO, DA ;

ANDERSON, NL ;

ZAHAREVITZ, D ;

CHABNER, BA ;

GREVER, MR ;

PAULL, KD .

STEM CELLS, 1994, 12 (01) :13-22

[7] An information-intensive approach to the molecular pharmacology of cancer [J].

Weinstein, JN ;

Myers, TG ;

OConnor, PM ;

Friend, SH ;

Fornace, AJ ;

Kohn, KW ;

Fojo, T ;

Bates, SE ;

Rubinstein, LV ;

Anderson, NL ;

Buolamwini, JK ;

vanOsdol, WW ;

Monks, AP ;

Scudiero, DA ;

Sausville, EA ;

Zaharevitz, DW ;

Bunow, B ;

Viswanadhan, VN ;

Johnson, GS ;

Wittes, RE ;

Paull, KD .

SCIENCE, 1997, 275 (5298) :343-349

[8] Biochemistry - A postgenomic visual icon [J].

Weinstein, John N. .

SCIENCE, 2008, 319 (5871) :1772-1773

[9] High-Throughput GoMiner, an 'industrial-strength' integrative gene ontology tool for interpretation of multiple-microarray experiments, with application to studies of Common Variable Immune Deficiency (CVID) [J].

Zeeberg, BR ;

Qin, HY ;

Narasimhan, S ;

Sunshine, M ;

Cao, H ;

Kane, DW ;

Reimers, M ;

Stephens, RM ;

Bryant, D ;

Burt, SK ;

Elnekave, E ;

Hari, DM ;

Wynn, TA ;

Cunningham-Rundles, C ;

Stewart, DM ;

Nelson, D ;

Weinstein, JN .

BMC BIOINFORMATICS, 2005, 6 (1)

← 1 →