Variants in multi-gene polymorphism association analysis of lung cancer in the Chinese Han population

被引:0
|
作者
Zhang, Yong [1 ]
Yang, Xiaomei [2 ]
You, Jiangtao [1 ]
Li, Shuo [1 ]
Duan, Mengling [3 ]
Li, Haijun [1 ]
He, Haiqi [1 ]
Chen, Nanzheng [1 ]
Jin, Tianbo [4 ,5 ]
Fu, Junke [1 ]
机构
[1] Xi An Jiao Tong Univ, Affiliated Hosp 1, Dept Thorac Surg, 96 277 West Yanta Rd, Xian 710061, Peoples R China
[2] Chinas Ordnance Ind Grp, Hosp 521, Xian 710065, Shannxi Provinc, Peoples R China
[3] Peoples Hosp Hainan Prov, Dept Emergency, Haikou 570102, Peoples R China
[4] Natl Engn Res Ctr Miniaturized Detect Syst, Xian 710069, Peoples R China
[5] NW Univ Xian, Sch Life Sci, Xian 710069, Shaanxi, Peoples R China
来源
INTERNATIONAL JOURNAL OF CLINICAL AND EXPERIMENTAL MEDICINE | 2016年 / 9卷 / 03期
关键词
Lung cancer; tag single nucleotide polymorphism (tSNP); case-control study; SYNTHETICALLY LETHAL; RAD52; INACTIVATION; CELL; EXPRESSION; VTI1A; CARCINOMA; MUTATION; BINDING; BRCA2; P63;
D O I
暂无
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Lung cancer (LC) is a common malignant tumor that is influenced by an interaction between genetic and environmental factors. Until now, the inherited factors of lung cancer have not been clear. Our study selected 16 tag single nucleotide polymorphisms (tSNPs) to investigate whether they were associated with lung cancer in the Han population. In this Han Chinese case-control study, we genotyped 554 cases and 696 controls using Sequenom MassARRAY technology and analyzed their associations with the cancer using chi(2) test, SNPStats software, and Microsoft Excel. Based on chi(2) tests, RBMS3-rs1530057 (P=0.05), TP63-rs4488809, rs10937405 (P=0.013, P=0.014), VTI1A-rs7086803 (P=0.03) and RAD52-rs10849605 (P=0.008) correlate with lung cancer risk. In the genetic model analyses, increased risk for lung cancer was associated with the genotypes "TT" in rs4488809 (OR=1.38, 95% CI, 1.03-1.86; P=0.033) in the recessive model and under the log-additive model (OR=1.2, 95% CI=1.00-1.43, P=0.046). Also, our analysis revealed the genotype "C/C" in rs10849605 was associated with increased risk of lung cancer under the codominant model (OR=1.71, 95% CI=1.13-2.58, P=0.039), the recessive model (OR=1.62, 95% CI=1.10-2.39, P=0.015), and under the log-additive model (P=0.021, OR=1.25, 95% CI=1.03-1.50). We found four genes (RBMS3, TP63, VTI1A and RAD52) are associated with lung cancer susceptibility. In combination with previous reports, our results suggest that these genes may be associated with lung cancer in the Han population.
引用
收藏
页码:6807 / 6812
页数:6
相关论文
共 50 条
  • [31] Polymorphisms in the TERT gene are associated with lung cancer risk in the Chinese Han population
    Gao, Lei
    Thakur, Asmitananda
    Liang, Yiqian
    Zhang, Shuo
    Wang, Ting
    Chen, Tianjun
    Meng, Junhui
    Wang, Li
    Wu, Fang
    Jin, Tianbo
    Li, Xiaolan
    Liu, Johnson J.
    Chen, Chao
    Chen, Mingwei
    EUROPEAN JOURNAL OF CANCER PREVENTION, 2014, 23 (06) : 497 - 501
  • [32] The influence of XRCC1 genetic variants on lung cancer susceptibility in Chinese Han population
    Wang, Yingyi
    Ni, Jianjiao
    Sun, Zhao
    Chen, Shuchang
    Jiao, Yuchen
    Bai, Chunmei
    GENE, 2015, 556 (02) : 127 - 131
  • [33] MTF1 genetic variants are associated with lung cancer risk in the Chinese Han population
    Cheng, Yujing
    Zhang, Chan
    Li, Qi
    Yang, Xin
    Chen, Wanlu
    He, Kunhua
    Chen, Mingwei
    BMC CANCER, 2024, 24 (01)
  • [34] Multiple genetic variants are associated with colorectal cancer risk in the Han Chinese population
    Wang, Nan
    Wang, Li
    Yang, Hua
    Zhang, Hui Qun
    Lan, Bing
    He, Xue
    Jin, Tian Bo
    Kang, Long Li
    Chen, Chao
    EUROPEAN JOURNAL OF CANCER PREVENTION, 2015, 24 (01) : 1 - 5
  • [35] Association of variants in microRNA with Parkinson's disease in Chinese Han population
    Li, Fang
    Liu, Han
    Cheng, Yuan
    Yang, Jing
    Liu, Yutao
    Wang, Yanlin
    Yang, Zhihua
    Shi, Changhe
    Xu, Yuming
    NEUROLOGICAL SCIENCES, 2018, 39 (02) : 353 - 357
  • [36] Association of polymorphisms in the telomere-related gene ACYP2 with lung cancer risk in the Chinese Han population
    Chen, Nanzheng
    Yang, Xiaomei
    Guo, Wen
    You, Jiangtao
    Wu, Qifei
    Zhang, Guangjian
    Li, Haijun
    Geng, Donghong
    Jin, Tianbo
    Fu, Junke
    Zhang, Yong
    ONCOTARGET, 2016, 7 (52) : 87473 - 87478
  • [37] Association between TIMP-2 gene polymorphism and breast cancer in Han Chinese women
    Kai Wang
    Guanying Wang
    Shangke Huang
    Anqi Luo
    Xin Jing
    Gang Li
    Yi Zhou
    Xinhan Zhao
    BMC Cancer, 19
  • [38] Association of the NOTCH4 Gene Polymorphism rs204993 with Schizophrenia in the Chinese Han Population
    Zhang, Bao
    Fan, Qian Rui
    Li, Wen Hao
    Lu, Ning
    Fu, Dong Ke
    Kang, Yan Jie
    Wang, Na
    Li, Teng
    Wen, Xiao Peng
    Li, Da Xu
    BIOMED RESEARCH INTERNATIONAL, 2015, 2015
  • [39] Association between interleukin-13 gene polymorphism and neonatal asthma in Han nationality Chinese population
    Wan, Aiying
    Yao, Baozhen
    Zhang, Xiao
    Li, Li
    INTERNATIONAL JOURNAL OF CLINICAL AND EXPERIMENTAL PATHOLOGY, 2016, 9 (02): : 2208 - 2214
  • [40] Polymorphisms and rare variants identified by next-generation sequencing confer risk for lung cancer in han Chinese population
    Li Xiaoqi
    Liu Jinsheng
    Wang Ke
    Zhou Juan
    Zhang Hang
    Zhang Mancang
    Shi Yongyong
    PATHOLOGY RESEARCH AND PRACTICE, 2020, 216 (04)