Quantitative structure-activity relationship and machine learning studies of 2-thiazolylhydrazone derivatives with anti-Cryptococcus neoformans activity

被引:4
|
作者
Fernandes, Philipe de Oliveira [1 ]
Martins, Joao Paulo A. [2 ]
de Melo, Eduardo B. [3 ]
de Oliveira, Renata Barbosa [1 ]
Kronenberger, Thales [4 ]
Maltarollo, Vinicius Goncalves [1 ]
机构
[1] Univ Fed Minas Gerais, Fac Farm, Dept Prod Farmaceut, Belo Horizonte, MG, Brazil
[2] Univ Fed Minas Gerais, Inst Ciencias Exatas, Dept Quim, Belo Horizonte, MG, Brazil
[3] Univ Estadual Oeste Parana, Lab Quim Med & Ambiental Teor, Cascavel, Parana, Brazil
[4] Univ Hosp Tubingen, Dept Pneumonol & Oncol, Internal Med 8, Tubingen, Baden Wurttembe, Germany
关键词
Antifungal agents; thiazolylhydrazones; Cryptococcus neoformans; QSAR; 2D-QSAR; 4D-QSAR; machine learning; random; forest; ligand-based drug; design (LBDD); RATIONAL SELECTION; TEST SETS; QSAR MODELS; VALIDATION; QSPR; REGRESSION; STRATEGY; PROGRAM; R(M)(2); TOOL;
D O I
10.1080/07391102.2021.1935321
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Cryptococcus neoformans is a fungus responsible for infections in humans with a significant number of cases in immunosuppressed patients, mainly in underdeveloped countries. In this context, the thiazolylhydrazones are a promising class of compounds with activity against C. neoformans. The understanding of the structure-activity relationship of these derivatives could lead to the design of robust compounds that could be promising drug candidates for fungal infections. Specifically, modern techniques such as 4D-QSAR and machine learning methods were employed in this work to generate two QSAR models (one 2D and one 4D) with high predictive power (r2 for the test set equals to 0.934 and 0.831, respectively), and one random forest classification model was reported with Matthews correlation coefficient equals to 1 and 0.62 for internal and external validations, respectively. The physicochemical interpretation of selected models, indicated the importance of aliphatic substituents at the hydrazone moiety to antifungal activity, corroborating experimental data.
引用
收藏
页码:9789 / 9800
页数:12
相关论文
共 50 条
  • [31] Quantitative Structure-Activity Relationship (QSAR) Studies for the Inhibition of MAOs
    Ramesh, Muthusamy
    Muthuraman, Arunachalam
    COMBINATORIAL CHEMISTRY & HIGH THROUGHPUT SCREENING, 2020, 23 (09) : 887 - 897
  • [32] A Robust Boosting Regression Tree with Applications in Quantitative Structure-Activity Relationship Studies of Organic Compounds
    Jiao, Jian
    Tan, Shi-Miao
    Luo, Rui-Ming
    Zhou, Yan-Ping
    JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2011, 51 (04) : 816 - 828
  • [33] Quantitative Structure-activity Relationship Analysis for Predicting Lipophilicity of Aniline Derivatives (Including Some Pharmaceutical Compounds)
    Rezaei, Morteza
    Mohammadinasab, Esmat
    Esfahani, Tahere Momeni
    COMBINATORIAL CHEMISTRY & HIGH THROUGHPUT SCREENING, 2019, 22 (05) : 333 - 345
  • [34] Development of Predictive Quantitative Structure-Activity Relationship Models of Epipodophyllotoxin Derivatives
    Naik, Pradeep Kumar
    Dubey, Abhishek
    Kumar, Rishay
    JOURNAL OF BIOMOLECULAR SCREENING, 2010, 15 (10) : 1194 - 1203
  • [35] Quantitative structure-activity relationships studies for prediction of antimicrobial activity of synthesized disulfonamide derivatives
    Alyar, Saliha
    Ozbek, Neslihan
    Kuzukiran, Kubra
    Karacan, Nurcan
    MEDICINAL CHEMISTRY RESEARCH, 2011, 20 (02) : 175 - 183
  • [36] Quantitative structure-activity relationship and design of polysubstituted quinoline derivatives as inhibitors of phosphodiesterase 4
    Gaurav, Anand
    Gautam, Vertika
    Singh, Ranjit
    MEDICINAL CHEMISTRY RESEARCH, 2012, 21 (10) : 3087 - 3103
  • [37] A Molecular Image-Based Novel Quantitative Structure-Activity Relationship Approach, Deepsnap-Deep Learning and Machine Learning
    Matsuzaka, Yasunari
    Uesawa, Yoshihiro
    CURRENT ISSUES IN MOLECULAR BIOLOGY, 2021, 42 : 455 - 471
  • [38] Advances in quantitative structure-activity relationship models of antimalarials
    Roy, Kunal
    Ojha, Probir Kumar
    EXPERT OPINION ON DRUG DISCOVERY, 2010, 5 (08) : 751 - 778
  • [39] Advances in quantitative structure-activity relationship models of antioxidants
    Roy, Kunal
    Mitra, Indrani
    EXPERT OPINION ON DRUG DISCOVERY, 2009, 4 (11) : 1157 - 1175
  • [40] Structure Activity Relationship and Quantitative Structure-Activity Relationships Modeling of Antitrypanosomal Activities of Alkyldiamine Cryptolepine Derivatives
    Belaidi, Salah
    Salah, Toufik
    Melkemi, Nadjib
    Sinha, Leena
    Prasad, Onkar
    JOURNAL OF COMPUTATIONAL AND THEORETICAL NANOSCIENCE, 2015, 12 (09) : 2421 - 2427