Diaporthe is paraphyletic

被引：149

作者：

Gao, Yahui ^{[1
,2
]}

Liu, Fang ^{[1
]}

Duan, Weijun ^{[3
]}

Crous, Pedro W. ^{[4
,5
]}

Cai, Lei ^{[1
,2
]}

机构：

[1] Chinese Acad Sci, Inst Microbiol, State Key Lab Mycol, Beijing 100101, Peoples R China

[2] Univ Chinese Acad Sci, Beijing 100049, Peoples R China

[3] Ningbo Acad Inspect & Quarantine, Ningbo 315012, Zhejiang, Peoples R China

[4] Westerdijk Fungal Biodivers Inst, Uppsalalaan 8, NL-3584 CT Utrecht, Netherlands

[5] Univ Pretoria, Dept Microbiol & Plant Pathol, Tree Protect Cooperat Programme, Forestry & Agr Biotechnol Inst, ZA-0002 Pretoria, South Africa

来源：

IMA FUNGUS | 2017年 / 8卷 / 01期

基金：

中国国家自然科学基金;

关键词：

Ascomycota; Diaporthales; Phomopsis; phylogeny; taxonomy; STEM-END ROT; PHYLOGENETIC REASSESSMENT; SPECIES BOUNDARIES; MAXIMUM-LIKELIHOOD; GENERIC NAMES; SOUTH-AFRICA; PRIMER SETS; 1ST REPORT; PHOMOPSIS; GENUS;

D O I：

10.5598/imafungus.2017.08.01.11

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

Previous studies have shown that our understanding of species diversity within Diaporthe (syn. Phomopsis) is limited. In this study, 49 strains obtained from different countries were subjected to DNA sequence analysis. Based on these results, eight new species names are introduced for lineages represented by multiple strains and distinct morphology. Twelve Phomopsis species previously described from China were subjected to DNA sequence analysis, and confirmed to belong to Diaporthe. The genus Diaporthe is shown to be paraphyletic based on multi-locus (LSU, ITS and TEF1) phylogenetic analysis. Several morphologically distinct genera, namely Mazzantia, Ophiodiaporthe, Pustulomyces, Phaeocytostroma, and Stenocarpella, are embedded within Diaporthe s. lat., indicating divergent morphological evolution. However, splitting Diaporthe into many smaller genera to achieve monophyly is still premature, and further collections and phylogenetic datasets need to be obtained to address this situation.

引用

页码：153 / 187

页数：35

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