Generalized run-and-turn motions: From bacteria to Levy walks

被引:37
作者
Detcheverry, Francois [1 ]
机构
[1] Univ Claude Bernard Lyon 1, CNRS, Inst Lumiere Matiere, F-69622 Villeurbanne, France
关键词
MOTILITY; DYNAMICS; VELOCITY; MODELS; VARIABILITY; DIFFUSION; PATTERNS;
D O I
10.1103/PhysRevE.96.012415
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
Swimming bacteria exhibit a repertoire of motility patterns, in which persistent motion is interrupted by turning events. What are the statistical properties of such random walks? If some particular instances have long been studied, the general case where turning times do not follow a Poisson process has remained unsolved. We present a generic extension of the continuous time random walks formalism relying on operators and noncommutative calculus. The approach is first applied to a unimodal model of bacterial motion. We examine the existence of a minimum in velocity correlation function and discuss the maximum of diffusivity at an optimal value of rotational diffusion. The model is then extended to bimodal patterns and includes as particular cases all swimming strategies: run-and-tumble, run-stop, run-reverse and run-reverse-flick. We characterize their velocity correlation functions and investigate how bimodality affects diffusivity. Finally, the wider applicability of the method is illustrated by considering curved trajectories and Levy walks. Our results are relevant for intermittent motion of living beings, be they swimming micro-organisms or crawling cells.
引用
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页数:18
相关论文
共 112 条
[51]   Bacterial Hydrodynamics [J].
Lauga, Eric .
ANNUAL REVIEW OF FLUID MECHANICS, VOL 48, 2016, 48 :105-130
[52]   Enhanced Diffusion by Reciprocal Swimming [J].
Lauga, Eric .
PHYSICAL REVIEW LETTERS, 2011, 106 (17)
[53]  
Lele PP, 2016, NAT PHYS, V12, P175, DOI [10.1038/nphys3528, 10.1038/NPHYS3528]
[54]   Dynamical continuous time random walk [J].
Liu, Jian ;
Yang, Bo ;
Chen, Xiaosong ;
Bao, Jing-Dong .
EUROPEAN PHYSICAL JOURNAL B, 2015, 88 (04)
[55]   Persistence of direction increases the drift velocity of run and tumble chemotaxis [J].
Locsei, J. T. .
JOURNAL OF MATHEMATICAL BIOLOGY, 2007, 55 (01) :41-60
[56]   STATISTICAL MEASURES OF BACTERIAL MOTILITY AND CHEMOTAXIS [J].
LOVELY, PS ;
DAHLQUIST, FW .
JOURNAL OF THEORETICAL BIOLOGY, 1975, 50 (02) :477-496
[57]   Hydrodynamics of soft active matter [J].
Marchetti, M. C. ;
Joanny, J. F. ;
Ramaswamy, S. ;
Liverpool, T. B. ;
Prost, J. ;
Rao, Madan ;
Simha, R. Aditi .
REVIEWS OF MODERN PHYSICS, 2013, 85 (03) :1143-1189
[58]   The CTRW in finance:: Direct and inverse problems with some generalizations and extensions [J].
Masoliver, Jaume ;
Montero, Miquel ;
Perello, Josep ;
Weiss, George H. .
PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS, 2007, 379 (01) :151-167
[59]   On the Origin and Characteristics of Noise-Induced Levy Walks of E. Coli [J].
Matthaeus, Franziska ;
Mommer, Mario S. ;
Curk, Tine ;
Dobnikar, Jure .
PLOS ONE, 2011, 6 (04)
[60]  
Mendez V, 2013, STOCHASTIC FDN MOVEM