Exploring the water hydrogen-bonding effects on the ground and low-lying excited states of serotonin

被引:1
作者
Santos, Jose L. F. [1 ]
Janegitz, Bruno C. [2 ]
de Oliveira, Marcos R. [3 ]
de Souza, Gabriel L. C. [1 ,4 ]
机构
[1] Univ Fed Mato Grosso, Dept Quim, BR-78060900 Cuiaba, MT, Brazil
[2] Univ Fed Sao Carlos, Dept Ciencias Nat Matemat & Educ, BR-13604900 Araras, SP, Brazil
[3] Univ Fed Rio Grande Do Sul, Dept Bioquim, BR-90040060 Porto Alegre, RS, Brazil
[4] Washington State Univ, Dept Chem, Pullman, WA 99164 USA
关键词
Serotonin; Water hydrogen-bonding; Photoabsorption; Solvation effects; ZETA VALENCE QUALITY; BASIS-SETS; CONFORMATIONAL PREFERENCES; ELECTRONIC-STRUCTURES; EXCITATION-ENERGIES; AQUEOUS-SOLUTION; DFT; APPROXIMATION; PERFORMANCE; COMPLEXES;
D O I
10.1016/j.molliq.2022.119130
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
In this work, we examined the ground and low-lying excited states of the serotonin (SERO) molecule and of four of its water hydrogen-bonded complexes (SERO-(H2O)(n), with n = 1 and 2). Density functional theory (DFT) and its time-dependent variant (TD-DFT) were used for determining, respectively, ground state properties (such as equilibrium structures and relative energetics, when applicable) and excited state parameters (vertical excitation energies, generalized oscillator strengths (GOS), and structures). The CAM-B3LYP exchange-correlation functional with the def2-TZVP basis set was used and all the computations were performed in the gas-phase and in water (through the use of the integral equation formalism polarizable continuum model, IEF-PCM). In terms of ground-state, the existence of the H center dot center dot center dot O-H center dot center dot center dot N interaction in one of the SERO-H2O conformations contributed to the stabilization of the system when compared to its corresponding counterpart, with solvation decreasing (from 3.43 kcal/mol in the gas-phase to 1.75 kcal/mol in water) the differences regarding their relative energies. While no major differences regarding the excitation energies associated to an accessible state are suggested from the comparison between the results obtained for a given system through the consideration of solvation and those corresponding determined in the gas-phase, the hydrogen-bond interactions (originating from the explicit water molecules) combined with the implicit (water) solvation may be responsible for providing synergic effects in terms of increasing both the GOS related to a given open state as well as the number of excited states accessible, suggesting an enhancement in the photoabsorption. Taking one of the SERO-(H2O)(2) conformations as instance, all the five lowest-lying excited singlets of the system were determined as being accessible (having GOS from 0.1036 to 0.5664) in water while only a single excited state (with GOS = 0.1150) is expected to be open in the gas-phase environment. (C) 2022 Elsevier B.V. All rights reserved.
引用
收藏
页数:10
相关论文
共 68 条
  • [1] Transmembrane signaling in the brain by serotonin, a key regulator of physiology and emotion
    Adayev, T
    Ranasinghe, B
    Banerjee, P
    [J]. BIOSCIENCE REPORTS, 2005, 25 (5-6) : 363 - 385
  • [2] The structural, functional, and dynamic effect of Tau tubulin kinase1 upon a mutation: A neuro-degenerative hotspot
    Ahamad, Shahzaib
    Hema, Kanipakam
    Kumar, Vijay
    Gupta, Dinesh
    [J]. JOURNAL OF CELLULAR BIOCHEMISTRY, 2021, 122 (11) : 1653 - 1664
  • [3] Theoretical conformational analysis for neurotransmitters in the gas phase and in aqueous solution. Serotonin
    Alagona, G
    Ghio, C
    Nagy, PI
    [J]. JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2005, 1 (05) : 801 - 816
  • [4] Riddles of the structure and vibrational dynamics of HO3 resolved near the ab initio limit
    Bartlett, Marcus A.
    Kazez, Arianna H.
    Schaefer, Henry F.
    Allen, Wesley D.
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2019, 151 (09)
  • [5] Treatment of electronic excitations within the adiabatic approximation of time dependent density functional theory
    Bauernschmitt, R
    Ahlrichs, R
    [J]. CHEMICAL PHYSICS LETTERS, 1996, 256 (4-5) : 454 - 464
  • [6] DENSITY-FUNCTIONAL THERMOCHEMISTRY .3. THE ROLE OF EXACT EXCHANGE
    BECKE, AD
    [J]. JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (07) : 5648 - 5652
  • [7] Benchmark and performance of long-range corrected time-dependent density functional tight binding (LC-TD-DFTB) on rhodopsins and light-harvesting complexes
    Bold, Beatrix M.
    Sokolov, Monja
    Maity, Sayan
    Wanko, Marius
    Dohmen, Philipp M.
    Kranz, Julian J.
    Kleinekathoefer, Ulrich
    Hoefener, Sebastian
    Elstner, Marcus
    [J]. PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2020, 22 (19) : 10500 - 10518
  • [8] Probing the nature of peripheral boryl groups within luminescent tellurophenes
    Braun, Christina A.
    Zomerman, Derek
    de Aguiar, Inara
    Qi, Yanyu
    Delgado, William Torres
    Ferguson, Michael J.
    McDonald, Robert
    de Souza, Gabriel L. C.
    He, Gang
    Brown, Alex
    Rivard, Eric
    [J]. FARADAY DISCUSSIONS, 2017, 196 : 255 - 268
  • [9] Serotonin and brain function: a tale of two receptors
    Carhart-Harris, R. L.
    Nutt, D. J.
    [J]. JOURNAL OF PSYCHOPHARMACOLOGY, 2017, 31 (09) : 1091 - 1120
  • [10] Molecular excitation energies to high-lying bound states from time-dependent density-functional response theory: Characterization and correction of the time-dependent local density approximation ionization threshold
    Casida, ME
    Jamorski, C
    Casida, KC
    Salahub, DR
    [J]. JOURNAL OF CHEMICAL PHYSICS, 1998, 108 (11) : 4439 - 4449