Solid-State NMR Characterization of the Structure of Self-Assembled Ile-Phe-OH

被引:4
|
作者
Kawamura, Izuru [1 ,2 ]
Shirakata, Hiroki [1 ]
Ozawa, Yumi [2 ]
Mijiddorj, Batsaikhan [2 ,3 ]
Ueda, Kazuyoshi [2 ]
机构
[1] Yokohama Natl Univ, Grad Sch Engn Sci, Yokohama, Kanagawa 2408501, Japan
[2] Yokohama Natl Univ, Grad Sch Engn, Yokohama, Kanagawa 2408501, Japan
[3] Natl Univ Mongolia, Sch Engn & Appl Sci, Ulaanbaatar 14201, Mongolia
关键词
solid-state NMR; dipeptide; self-assembly; natural isotopic abundance; CHEMICAL-SHIFTS; DIPHENYLALANINE PEPTIDE; BACTERIORHODOPSIN; PROTEINS;
D O I
10.3390/magnetochemistry4030030
中图分类号
O61 [无机化学];
学科分类号
070301 ; 081704 ;
摘要
Solid-state nuclear magnetic resonance (NMR) spectroscopy provides significant structural information regarding the conformation and dynamics of a variety of solid samples. In this study, we recorded the C-13 and N-15 solid-state NMR spectra of a self-assembled isoleucine-phenylalanine (Ile-Phe-OH) dipeptide. Immediately after the addition of hexane to a solution of concentrated peptide in ethyl acetate, the peptide visually aggregated into a nanofiber. Then, we obtained well-resolved C-13 and N-15 NMR signals of the natural, isotopic-abundant Ile-Phe-OH peptide in the nanofiber. Furthermore, we calculated the chemical shift values of the reported crystal structure of the Ile-Phe dipeptide via the density functional theory (DFT) calculation and compared these results with the experimental values. Notably, the two sets of values were in good agreement with each other, which indicated that the self-assembled structure closely reflected the crystal structure. Therefore, herein, we demonstrated that solid-state NMR characterization combined with DFT calculations is a powerful method for the investigation of molecular structures in self-assembled short peptides.
引用
收藏
页数:9
相关论文
共 50 条
  • [1] Solid-state NMR studies of self-assembled monolayers
    Gao, W.
    Reven, L.
    Langmuir, 1995, 11 (06):
  • [2] SOLID-STATE NMR-STUDIES OF SELF-ASSEMBLED MONOLAYERS
    GAO, W
    REVEN, L
    LANGMUIR, 1995, 11 (06) : 1860 - 1863
  • [3] Self-Assembled Oligoanilinic Nanosheets: Molecular Structure Revealed by Solid-State NMR Spectroscopy
    Zujovic, Zoran
    Webber, Amy L.
    Travas-Sejdic, Jadranka
    Brown, Steven P.
    MACROMOLECULES, 2015, 48 (24) : 8838 - 8843
  • [4] Self-assembled monolayers of alkanoic acids: A solid-state NMR study
    Pawsey, S
    Yach, K
    Halla, J
    Reven, L
    LANGMUIR, 2000, 16 (07) : 3294 - 3303
  • [5] Chain dynamics in self-assembled monolayers: Solid-state NMR studies.
    Reven, L
    Gao, W
    Badia, A
    Dickenson, L
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1996, 212 : 215 - INOR
  • [6] Modifications under Irradiation of a Self-Assembled Monolayer Grafted on a Nanoporous Silica Glass: A Solid-State NMR Characterization
    Le Caer, S.
    Brunet, F.
    Chatelain, C.
    Durand, D.
    Dauvois, V.
    Charpentier, T.
    Renault, J. Ph.
    JOURNAL OF PHYSICAL CHEMISTRY C, 2012, 116 (07): : 4748 - 4759
  • [7] Self-assembled viologens on HOPG: solid-state NMR and AFM unravel the location of the anions
    Joseph, Jean
    Raya, Jesus
    Palmino, Frank
    Jeannoutot, Judicael
    Berville, Mathilde
    Weiss, Jean
    Cherioux, Frederic
    Wytko, Jennifer A.
    NANOSCALE, 2024, 16 (27) : 13089 - 13095
  • [8] Towards Structure Determination of Self-Assembled Peptides Using Dynamic Nuclear Polarization Enhanced Solid-State NMR Spectroscopy
    Takahashi, Hiroki
    Viverge, Bastien
    Lee, Daniel
    Rannou, Patrice
    De Paepe, Gael
    ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2013, 52 (27) : 6979 - 6982
  • [9] Structural analysis of nanoscale self-assembled discoidal lipid bilayers by solid-state NMR spectroscopy
    Li, Ying
    Kijac, Aleksandra Z.
    Sligar, Stephen G.
    Rienstra, Chad M.
    BIOPHYSICAL JOURNAL, 2006, 91 (10) : 3819 - 3828
  • [10] THE SOLID-STATE SELF-ORGANIZATION OF A SELF-ASSEMBLED [2]CATENANE
    AMABILINO, DB
    ASHTON, PR
    STODDART, JF
    MENZER, S
    WILLIAMS, DJ
    JOURNAL OF THE CHEMICAL SOCIETY-CHEMICAL COMMUNICATIONS, 1994, (21) : 2475 - 2478