Enrichment of LOVD-USHbases with 152 USH2A Genotypes Defines an Extensive Mutational Spectrum and Highlights Missense Hotspots

被引:54
作者
Baux, David [1 ]
Blanchet, Catherine [2 ,3 ]
Hame, Christian [3 ]
Meunier, Isabelle [3 ]
Larrieu, Lise [1 ]
Faugere, Valerie [1 ]
Vache, Christel [1 ]
Castorina, Pierangela [4 ,5 ]
Puech, Bernard [6 ]
Bonneau, Dominique [7 ,8 ]
Malcolm, Sue [9 ]
Claustres, Mireille [1 ,10 ,11 ]
Roux, Anne-Francoise [1 ,10 ]
机构
[1] CHU Montpellier, Lab Genet Mol, F-34000 Montpellier, France
[2] CHU Montpellier, Serv ORL, F-34000 Montpellier, France
[3] CHU Montpellier, Ctr Natl Reference Malad Rares Affect Sensorielle, F-34000 Montpellier, France
[4] Fdn IRCCS Ca Granda Osped Maggiore Policlin, UOC Audiol, Milan, Italy
[5] Fdn IRCCS Ca Granda Osped Maggiore Policlin, UO Nefrol & Dialisi, Milan, Italy
[6] CHU Lille, Hop Roger Salengro Explorat Vis & Neuroophtalmol, F-59037 Lille, France
[7] CHU Angers, Serv Genet, F-49933 Angers, France
[8] UMR CNRS 6214 INSERM 771, F-49000 Angers, France
[9] UCL, Inst Child Hlth, London, England
[10] INSERM, U827, F-34000 Montpellier, France
[11] Univ Montpellier I, UFR Med, Lab Genet Mol, F-34000 Montpellier, France
关键词
usher syndrome; USH2A Usherin LSDB; Fibroneetin type III; Larninin 1EGF like; HAIR-CELLS; PROTEIN; GENE; USHERIN; IDENTIFICATION; DIAGNOSIS; VARIANTS; ISOFORM; LINKS; SCORE;
D O I
10.1002/humu.22608
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Alterations of USH2 encoding are responsible for more than '7 ages Usher s syndrome type (USH2), a recessive disorder he loss and retinal degedes usherM isoform 5.202-amino-ai. d p with an exceptional a e extracellul nsisting notably of a Lan-limn Nteuninal domain and numer, inin EGFdike (LE) and Fibronectin type 111 (EN3) re ations o are scattere t ro t e gene ari private. Annotatitig these variants is theret uajor p o correctly assign pathogenicity. We have x sively genotyp d a novel cohort of 152 Usher patients arid ideritified 58 different mutations, of which 93 are nen ly d bed. Pool, g this new data with the existing pathogenic vart alread ed bases reveals several previously unappr ed of the mutational spectrum. 'We show that parts p a ikeh Aerate single amino acid variations-, hereas o hers ti ute pathogenic misserise hotspots. We have nd, rept-E and FN3 domains, a nonequal distributio the missense mutat that highlights some crucial positions iri usherin with pos sequerices for the assessment of the pathogenicity nu u ense variants identified in USH2A.
引用
收藏
页码:1179 / 1186
页数:8
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