A marine bacterial community capable of degrading poly(ethylene terephthalate) and polyethylene

被引:168
作者
Gao, Rongrong [1 ,2 ,3 ,4 ,5 ]
Sun, Chaomin [1 ,2 ,3 ,5 ]
机构
[1] Chinese Acad Sci, CAS & Shandong Prov Key Lab Expt Marine Biol, Inst Oceanol, Qingdao, Peoples R China
[2] Chinese Acad Sci, Ctr Deep Sea Res, Inst Oceanol, Qingdao, Peoples R China
[3] Qingdao Natl Lab Marine Sci & Technol, Lab Marine Biol & Biotechnol, Qingdao, Peoples R China
[4] Univ Chinese Acad Sci, Coll Earth Sci, Beijing, Peoples R China
[5] Chinese Acad Sci, Ctr Ocean Mega Sci, Qingdao, Peoples R China
关键词
Ocean; Plastics; Bacterial community reconstitution; Degradation; Pollution; ENVIRONMENTAL BIODEGRADATION; MOLECULAR-WEIGHT; PLASTIC DEBRIS; DEGRADATION; TEREPHTHALATE; WASTE; HYDROLYSIS; WATER; CRYSTALLINITY; MICROPLASTICS;
D O I
10.1016/j.jhazmat.2021.125928
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
Plastic wastes are becoming the most common form of marine debris and present a growing global pollution problem. Here, we used a screening approach on hundreds of plastic waste-associated samples and discovered a marine bacterial community capable of efficiently colonizing and degrading both poly(ethylene terephthalate) (PET) and polyethylene (PE). Using absolute quantitative 16S rRNA sequencing and cultivation methods, we obtained corresponding abundance and purified cultures of three bacterial strains that mediated plastic degradation. We further performed numerous techniques to characterize the efficient degradation of PET and PE by the reconstituted bacterial community containing these three bacteria. Additionally, we used liquid chromatography-mass spectrometry to further demonstrate the degradation of PET and PE films by the reconstituted bacterial community. We conducted transcriptomic methods to investigate the plastic degradation process and potential degradation mechanisms mediated by our reconstituted bacterial community. Lastly, we overexpressed PE degradation enzymes based on transcriptomic results and verified their significant degradation effects on the PE films. Overall, our study establishes a stable marine bacterial community that efficiently degrades PET and PE and provides insights into plastic degradation pathways and their associated biological and mechanistic processes-paving the way for developing microbial products against plastic wastes.
引用
收藏
页数:12
相关论文
共 60 条
[1]   Gene Ontology: tool for the unification of biology [J].
Ashburner, M ;
Ball, CA ;
Blake, JA ;
Botstein, D ;
Butler, H ;
Cherry, JM ;
Davis, AP ;
Dolinski, K ;
Dwight, SS ;
Eppig, JT ;
Harris, MA ;
Hill, DP ;
Issel-Tarver, L ;
Kasarskis, A ;
Lewis, S ;
Matese, JC ;
Richardson, JE ;
Ringwald, M ;
Rubin, GM ;
Sherlock, G .
NATURE GENETICS, 2000, 25 (01) :25-29
[2]   The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000 [J].
Bairoch, A ;
Apweiler, R .
NUCLEIC ACIDS RESEARCH, 2000, 28 (01) :45-48
[3]   SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing [J].
Bankevich, Anton ;
Nurk, Sergey ;
Antipov, Dmitry ;
Gurevich, Alexey A. ;
Dvorkin, Mikhail ;
Kulikov, Alexander S. ;
Lesin, Valery M. ;
Nikolenko, Sergey I. ;
Son Pham ;
Prjibelski, Andrey D. ;
Pyshkin, Alexey V. ;
Sirotkin, Alexander V. ;
Vyahhi, Nikolay ;
Tesler, Glenn ;
Alekseyev, Max A. ;
Pevzner, Pavel A. .
JOURNAL OF COMPUTATIONAL BIOLOGY, 2012, 19 (05) :455-477
[4]   Accumulation and fragmentation of plastic debris in global environments [J].
Barnes, David K. A. ;
Galgani, Francois ;
Thompson, Richard C. ;
Barlaz, Morton .
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2009, 364 (1526) :1985-1998
[5]   Effect of hydrolysis products on the enzymatic degradation of polyethylene terephthalate nanoparticles by a polyester hydrolase from Thermobifida fusca [J].
Barth, Markus ;
Oeser, Thorsten ;
Wei, Ren ;
Then, Johannes ;
Schmidt, Juliane ;
Zimmermann, Wolfgang .
BIOCHEMICAL ENGINEERING JOURNAL, 2015, 93 :222-228
[6]   Polyethylene bio-degradation by caterpillars of the wax moth Galleria mellonella [J].
Bombelli, Paolo ;
Howe, Christopher J. ;
Bertocchini, Federica .
CURRENT BIOLOGY, 2017, 27 (08) :R292-R293
[7]   Environmental biodegradation of polyethylene [J].
Bonhomme, S ;
Cuer, A ;
Delort, AM ;
Lemaire, J ;
Sancelme, M ;
Scott, G .
POLYMER DEGRADATION AND STABILITY, 2003, 81 (03) :441-452
[8]   Enzymatic and chemical hydrolysis of poly(ethylene terephthalate) fabrics [J].
Brueckner, Tina ;
Eberl, Anita ;
Heumann, Sonja ;
Rabe, Maike ;
Guebitz, Georg M. .
JOURNAL OF POLYMER SCIENCE PART A-POLYMER CHEMISTRY, 2008, 46 (19) :6435-6443
[9]   The plastic-associated microorganisms of the North Pacific Gyre [J].
Carson, Henry S. ;
Nerheim, Magnus S. ;
Carroll, Katherine A. ;
Eriksen, Marcus .
MARINE POLLUTION BULLETIN, 2013, 75 (1-2) :126-132
[10]   The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants [J].
Cock, Peter J. A. ;
Fields, Christopher J. ;
Goto, Naohisa ;
Heuer, Michael L. ;
Rice, Peter M. .
NUCLEIC ACIDS RESEARCH, 2010, 38 (06) :1767-1771