Luteolibacter marinus sp. nov., a novel bacterium in the family Verrucomicrobiaceae, isolated from marine sediment

被引:2
作者
Xie, Feilu [1 ]
Zhu, Suting [1 ]
Guo, Chaobo [1 ]
Liu, Xinyu [1 ]
He, Shan [1 ,2 ]
Zhang, Weiyan [1 ]
机构
[1] Ningbo Univ, Coll Food & Pharmaceut Sci, Li Dak Sum Yip Yio Chin Kenneth Li Marine Biopharm, Ningbo 315800, Peoples R China
[2] Peking Univ, Ningbo Inst Marine Med, Ningbo 315800, Peoples R China
基金
中国国家自然科学基金;
关键词
Luteolibacter marinus; marine sediment; taxonomy; ARCTIC TUNDRA SOIL; GEN; NOV; PHYLUM VERRUCOMICROBIA; EMENDED DESCRIPTION; SEQUENCES;
D O I
10.1099/ijsem.0.005544
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-negative, rod-shaped, non-motile and strictly aerobic bacterium, designated NBU1238T, was isolated from marine sedi-ment sampled on Meishan Island located in the East China Sea. Strain NBU1238(T) was able to grow optimally at 28-32 degrees C, at pH 7.5 and with no NaCl. Catalase and oxidase activities, H2S production and hydrolysis of Tweens 40 and 60 were positive. Methyl red reaction, Voges-Proskauer test and hydrolysis of starch, casein and Tweens 20 and 80 were negative. The major cellular fatty acids were iso-C-14:0, C-16:0, C-16:1 ?9c and C-14:0. The only respiratory quinone was menaquinone- 9. The major polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and phosphatidylmethylethanolamine. The 16S rRNA gene sequence of strain NBU1238(T) showed 95.6, 95.6, 94.8 and 93.8% sequence similarity to Luteolibacter flavescens GKX(T), Luteolibacter luteus G-1-1-1(T), Luteolibacter arcticus MC 3726(T) and Luteolibacter pohnpeiensis A4T-83(T), respectively. Phylogenetic analyses indicated that strain NBU1238(T) clustered with the genus Luteolibacter and was closely related to strains L. flavescens GKX(T), L. arcticus MC 3726(T) and L. luteus G-1-1-1(T). The average nucleotide identity and digital DNA-DNA hybridization values between strain NBU1238(T) and related species of genus Luteolibacter were well below the threshold limit for prokaryotic species delineation. The DNA G+C content of the genomic DNA was 65.0 mol%. Based on its phenotypic, chemotaxonomic and genotypic data, strain NBU1238(T) is considered to be a representative of a novel species in the genus Luteolibacter, for which the name Luteolibacter marinus sp. nov. is proposed. The type strain is NBU1238(T) (=KCTC 82227(T)=MCCC 1K04772(T)).
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页数:7
相关论文
共 27 条
[1]   Luteolibacter ambystomatis sp. nov., isolated from the skin of an Anderson's salamander (Ambystoma andersoni) [J].
Busse, Hans-Juergen ;
Kaempfer, Peter ;
Szostak, Michael Peter ;
Spergser, Joachim .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2021, 71 (10)
[2]   Luteolibacter luteussp. nov., isolated from stream bank soil [J].
Dahal, Ram Hari ;
Chaudhary, Dhiraj Kumar ;
Kim, Dong-Uk ;
Kim, Jaisoo .
ARCHIVES OF MICROBIOLOGY, 2021, 203 (01) :377-382
[3]  
Dong XZ, 2001, Determinative Manual for Routine Bacteriology, V1st, P353
[4]   EVOLUTIONARY TREES FROM DNA-SEQUENCES - A MAXIMUM-LIKELIHOOD APPROACH [J].
FELSENSTEIN, J .
JOURNAL OF MOLECULAR EVOLUTION, 1981, 17 (06) :368-376
[5]   TOWARD DEFINING COURSE OF EVOLUTION - MINIMUM CHANGE FOR A SPECIFIC TREE TOPOLOGY [J].
FITCH, WM .
SYSTEMATIC ZOOLOGY, 1971, 20 (04) :406-&
[6]   Luteolibacter cuticulihirudinis sp nov., isolated from Hirudo medicinalis [J].
Glaeser, Stefanie P. ;
Galatis, Harald ;
Martin, Karin ;
Kaempfer, Peter .
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2012, 102 (02) :319-324
[7]   Luteolibacter luojiensis sp nov., isolated from Arctic tundra soil, and emended description of the genus Luteolibacter [J].
Jiang, Fan ;
Li, Wenjuan ;
Xiao, Mengchen ;
Dai, Jun ;
Kan, Wenjing ;
Chen, Lu ;
Li, Wenxin ;
Fang, Chengxiang ;
Peng, Fang .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2012, 62 :2259-2263
[8]  
Kates M., 1986, TECHNIQUES LIPIDOLOG
[9]   Luteolibacter arcticus sp nov., isolated from high Arctic tundra soil, and emended description of the genus Luteolibacter [J].
Kim, MyongChol ;
Pak, SeHong ;
Rim, SongGuk ;
Ren, Lvzhi ;
Jiang, Fan ;
Chang, Xulu ;
Liu, Ping ;
Zhang, Yumin ;
Fang, Chengxiang ;
Zheng, Congyi ;
Peng, Fang .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2015, 65 :1922-1928