Cross-contamination during processing of dried blood spots used for rapid diagnosis of HIV-1 infection of infants is rare and avoidable

被引:14
作者
Mitchell, Caroline [2 ]
Kraft, Kelli [1 ]
Peterson, Do [1 ]
Frenkel, Lisa [1 ,3 ,4 ]
机构
[1] Seattle Childrens Hosp Res, Seattle, WA 98101 USA
[2] Univ Washington, Dept Obstet & Gynecol, Seattle, WA 98195 USA
[3] Univ Washington, Dept Pediat, Seattle, WA 98195 USA
[4] Univ Washington, Dept Lab Med, Seattle, WA 98195 USA
关键词
Dried blood spots; Infant HIV diagnosis; PCR contamination; IMMUNODEFICIENCY-VIRUS TYPE-1; SUBTYPE-B DNA; FILTER-PAPER; SAMPLES;
D O I
10.1016/j.jviromet.2009.10.016
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Dried blood spot (DBS) samples are a convenient way to collect infant blood for HIV-1 diagnostic testing. Minimizing the risk of false positives is critical for diagnostic tests. A protocol for processing and testing DBS for infant HIV-1 diagnosis was evaluated to identify the rate and source of false-positive results. DES were created on Flinders Technology Associates (FTA) filter paper with 500 copies/punch (high) or 5000 copies/punch (very high) concentrations of HIV-1 DNA. Blank discs of filter paper punched after DBS samples were tested for carry-over of HIV-1 DNA using nested PCR for the pol region. No false positives were detected in the 40 series using high concentration DBS. In series with very high concentrations of HIV-1, 8/246 (3%) reactions were falsely positive. When tubes were spun prior to opening, contact with caps minimized, and spaces left between lanes of the gel, repeat second-round PCR of five false positives resulted in only one repeat false-positive PCR. This study outlines procedures that minimize false-positive results for nested PCR of HIV-1 DNA from DBS. (C) 2009 Elsevier B.V. All rights reserved.
引用
收藏
页码:489 / 491
页数:3
相关论文
共 7 条
[1]   Simple, sensitive, and specific detection of human immunodeficiency virus type 1 subtype B DNA in dried blood samples for diagnosis in infants in the field [J].
Beck, IA ;
Drennan, KD ;
Melvin, AJ ;
Mohan, KM ;
Herz, AM ;
Alarcón, J ;
Piscoya, J ;
Velázquez, C ;
Frenkel, LM .
JOURNAL OF CLINICAL MICROBIOLOGY, 2001, 39 (01) :29-33
[2]   Dried blood spots collected on filter paper: An international resource for the diagnosis and genetic characterization of human immunodeficiency virus type-1 [J].
Cassol, SA ;
Read, S ;
Weniger, BG ;
Gomez, P ;
Lapointe, N ;
Ou, CY ;
Babu, PG .
MEMORIAS DO INSTITUTO OSWALDO CRUZ, 1996, 91 (03) :351-358
[3]   Low risk of contamination with automated and manual excision of dried blood spots for HIV DNA PCR testing in the routine laboratory [J].
Driver, Glenn A. ;
Patton, Janet C. ;
Moloi, Jackie ;
Stevens, Wendy S. ;
Sherman, Gayle G. .
JOURNAL OF VIROLOGICAL METHODS, 2007, 146 (1-2) :397-400
[4]   Persistence of human immunodeficiency virus type 1 subtype B DNA in dried-blood samples on FTA filter paper [J].
Li, CC ;
Beck, IA ;
Seidel, KD ;
Frenkel, LA .
JOURNAL OF CLINICAL MICROBIOLOGY, 2004, 42 (08) :3847-3849
[5]   Diminished human immunodeficiency virus type 1 DNA yield from dried blood spots after storage in a humid incubator at 37°C compared to-20°C [J].
Mitchell, Caroline ;
Jennings, Cheryl ;
Brambilla, Donald ;
Aldrovandi, Grace ;
Amedee, Angela Martin ;
Beck, Ingrid ;
Bremer, James W. ;
Coombs, Robert ;
Decker, Don ;
Fiscus, Susan ;
Fitzgibbon, Joseph ;
Luzuriaga, Katherine ;
Moye, John ;
Palumbo, Paul ;
Reichelderfer, Patricia ;
Somasundaran, Mohan ;
Stevens, Wendy ;
Frenkel, Lisa .
JOURNAL OF CLINICAL MICROBIOLOGY, 2008, 46 (09) :2945-2949
[6]   Early Antiretroviral Therapy and Mortality among HIV-Infected Infants. [J].
Violari, Avy ;
Cotton, Mark F. ;
Gibb, Diana M. ;
Babiker, Abdel G. ;
Steyn, Jan ;
Madhi, Shabir A. ;
Jean-Philippe, Patrick ;
McIntyre, James A. .
NEW ENGLAND JOURNAL OF MEDICINE, 2008, 359 (21) :2233-2244
[7]   HIV-1 drug resistance genotyping from dried blood spots stored for 1 year at 4°C [J].
Youngpairoj, Ae S. ;
Masciotra, Silvina ;
Garrido, Carolina ;
Zahonero, Natalia ;
de Mendoza, Carmen ;
Garcia-Lerma, J. Gerardo .
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 2008, 61 (06) :1217-1220