Increased richness and diversity of the vaginal microbiota and spontaneous preterm birth

被引:134
作者
Freitas, Aline C. [1 ]
Bocking, Alan [2 ,3 ,4 ]
Hill, Janet E. [1 ]
Money, Deborah M. [5 ,6 ]
机构
[1] Univ Saskatchewan, Dept Vet Microbiol, Saskatoon, SK S7N 5B4, Canada
[2] Univ Toronto, Dept Obstet & Gynaecol, Toronto, ON M5G 1L4, Canada
[3] Univ Toronto, Dept Physiol, Toronto, ON M5G 1L4, Canada
[4] Lunenfeld Tanenbaum Res Inst, Toronto, ON M5T 1X5, Canada
[5] Univ British Columbia, Dept Obstet & Gynaecol, Vancouver, BC V6T 1Z4, Canada
[6] BC Womens Hosp & Hlth Ctr, Womens Hlth Res Inst, Vancouver, BC V6H 3N1, Canada
基金
加拿大健康研究院;
关键词
Microbiome; Vagina; Lactobacillus; CST; Diversity; Richness; Mollicutes; preterm birth; pregnancy; Infection; BACTERIAL VAGINOSIS; AMNIOTIC-FLUID; MATERNAL AGE; HISTOLOGIC CHORIOAMNIONITIS; UREAPLASMA-UREALYTICUM; MYCOPLASMA-GENITALIUM; CLINICAL-SIGNIFICANCE; WOMEN; INFECTION; RISK;
D O I
10.1186/s40168-018-0502-8
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Background: The bacterial community present in the female lower genital tract plays an important role in maternal and neonatal health. Imbalances in this microbiota have been associated with negative reproductive outcomes, such as spontaneous preterm birth (sPTB), but the mechanisms underlying the association between a disturbed microbiota and sPTB remain poorly understood. An intrauterine infection ascending from the vagina is thought to be an important contributor to the onset of preterm labour. Our objective was to characterize the vaginal microbiota of pregnant women who had sPTB (n =46) and compare to those of pregnant women who delivered at term (n = 170). Vaginal swabs were collected from women at 11-16 weeks of gestational age. Microbiota profiles were created by PCR amplification and pyrosequencing of the cpn60 universal target region. Results: Profiles clustered into seven community state types: I (Lactobacillus crispatus dominated), II (Lactobacillus gasseri dominated), III (Lactobacillus iners dominated), IVA (Gardnerella vaginalis subgroup B or mix of species), IVC (G. vaginalis subgroup A dominated), IVD (G. vaginalis subgroup C dominated) and V (Lactobacillus jensenii dominated). The microbiota of women who experienced preterm birth (< 37 weeks gestation) had higher richness and diversity and higher Mollicutes prevalence when compared to those of women who delivered at term. The two groups did not duster according to CST, likely because CST assignment is driven in most cases by the dominance of one particular species, overwhelming the contributions of more rare taxa. In conclusion, we did not identify a specific microbial community structure that predicts sPTB, but differences in microbiota richness, diversity and Mollicutes prevalence were observed between groups. Conclusions: Although a causal relationship remains to be determined, our results confirm previous reports of an association between Mollicutes and sPTB and further suggest that a more diverse microbiome may be important in the pathogenesis of some cases.
引用
收藏
页数:15
相关论文
共 76 条
[21]   A new metric for probability distributions [J].
Endres, DM ;
Schindelin, JE .
IEEE TRANSACTIONS ON INFORMATION THEORY, 2003, 49 (07) :1858-1860
[22]   ANOVA-Like Differential Expression (ALDEx) Analysis for Mixed Population RNA-Seq [J].
Fernandes, Andrew D. ;
Macklaim, Jean M. ;
Linn, Thomas G. ;
Reid, Gregor ;
Gloor, Gregory B. .
PLOS ONE, 2013, 8 (07)
[23]   Differences in vaginal microbiome in African American women versus women of European ancestry [J].
Fettweis, Jennifer M. ;
Brooks, J. Paul ;
Serrano, Myrna G. ;
Sheth, Nihar U. ;
Girerd, Philippe H. ;
Edwards, David J. ;
Strauss, Jerome F., III ;
Jefferson, Kimberly K. ;
Buck, Gregory A. .
MICROBIOLOGY-SGM, 2014, 160 :2272-2282
[24]   Mycoplasma, bacterial vaginosis-associated bacteria BVAB3, race, and risk of preterm birth in a high-risk cohort [J].
Foxman, Betsy ;
Wen, Ai ;
Srinivasan, Usha ;
Goldberg, Deborah ;
Marrs, Carl F. ;
Owen, John ;
Wing, Deborah A. ;
Misra, Dawn .
AMERICAN JOURNAL OF OBSTETRICS AND GYNECOLOGY, 2014, 210 (03) :226.e1-226.e7
[25]   ASSOCIATION OF YOUNG MATERNAL AGE WITH ADVERSE REPRODUCTIVE OUTCOMES [J].
FRASER, AM ;
BROCKERT, JE ;
WARD, RH .
NEW ENGLAND JOURNAL OF MEDICINE, 1995, 332 (17) :1113-1117
[26]   The vaginal microbiome of pregnant women is less rich and diverse, with lower prevalence of Mollicutes, compared to non-pregnant women [J].
Freitas, Aline C. ;
Chaban, Bonnie ;
Bocking, Alan ;
Rocco, Maria ;
Yang, Siwen ;
Hill, Janet E. ;
Money, Deborah M. .
SCIENTIFIC REPORTS, 2017, 7
[27]   Identification and sequencing of bacterial rDNAs in culture-negative amniotic fluid from women in premature labor [J].
Gardella, C ;
Riley, DE ;
Hitti, J ;
Agnew, K ;
Krieger, JN ;
Eschenbach, D .
AMERICAN JOURNAL OF PERINATOLOGY, 2004, 21 (06) :319-323
[28]   Mechanisms of disease - Intrauterine infection and preterm delivery [J].
Goldenberg, RL ;
Hauth, JC ;
Andrews, WW .
NEW ENGLAND JOURNAL OF MEDICINE, 2000, 342 (20) :1500-1507
[29]   Full-length transcriptome assembly from RNA-Seq data without a reference genome [J].
Grabherr, Manfred G. ;
Haas, Brian J. ;
Yassour, Moran ;
Levin, Joshua Z. ;
Thompson, Dawn A. ;
Amit, Ido ;
Adiconis, Xian ;
Fan, Lin ;
Raychowdhury, Raktima ;
Zeng, Qiandong ;
Chen, Zehua ;
Mauceli, Evan ;
Hacohen, Nir ;
Gnirke, Andreas ;
Rhind, Nicholas ;
di Palma, Federica ;
Birren, Bruce W. ;
Nusbaum, Chad ;
Lindblad-Toh, Kerstin ;
Friedman, Nir ;
Regev, Aviv .
NATURE BIOTECHNOLOGY, 2011, 29 (07) :644-U130
[30]   Maternal underweight and the risk of preterm birth and low birth weight: a systematic review and meta-analyses [J].
Han, Zhen ;
Mulla, Sohail ;
Beyene, Joseph ;
Liao, Grace ;
McDonald, Sarah D. .
INTERNATIONAL JOURNAL OF EPIDEMIOLOGY, 2011, 40 (01) :65-101