Effect of prolonged exposure to organic solvents on the active site environment of subtilisin Carlsberg

被引:12
作者
Bansal, Vibha [1 ]
Delgado, Yamixa [1 ]
Fasoli, Ezio [1 ]
Ferrer, Amaris [1 ]
Griebenow, Kai [2 ]
Secundo, Francesco [3 ]
Barletta, Gabriel L. [1 ]
机构
[1] Univ Puerto Rico, Dept Chem, Humacao, PR 00791 USA
[2] Univ Puerto Rico Rio Piedras, Dept Chem, Rio Piedras, PR USA
[3] Ist Chim Riconoscimento Mol, Milan, Italy
基金
美国国家卫生研究院;
关键词
Enzyme catalysis in organic solvents; Enzyme storage stability in organic solvents; Active-site polarity; Subtilisin Carlsberg; HIGH INITIAL ACTIVITY; FLUORESCENT DERIVATIVES; SECONDARY STRUCTURE; ENZYME-ACTIVITY; ENANTIOSELECTIVITY; STABILITY; MACROMOLECULES; DYNAMICS; POLARITY; RANGE;
D O I
10.1016/j.molcatb.2010.01.021
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The potential of enzyme catalysis as a tool for organic synthesis is nowadays indisputable, as is the fact that organic solvents affect an enzyme's activity, selectivity and stability. Moreover, it was recently realized that an enzyme's initial activity is substantially decreased after prolonged exposure to organic media, an effect that further hampers their potential as catalysts for organic synthesis. Regrettably, the mechanistic reasons for these effects are still debatable. In the present study we have made an attempt to explain the reasons behind the partial loss of enzyme activity on prolonged exposure to organic solvents. Fluorescence spectroscopic studies of the serine protease subtilisin Carlsberg chemically modified with polyethylene glycol (PEG-SC) and inhibited with a dansyl fluorophore, and dissolved in two organic solvents (acetonitrile and 1,4-dioxane) indicate that when the enzyme is initially introduced into these solvents, the active site environment is similar to that in water: however prolonged exposure to the organic medium causes this environment to resemble that of the solvent in which the enzyme is dissolved. Furthermore, kinetic studies show a reduction on both 14,,,,x and Km as a result of prolonged exposure to the solvents. One interpretation of these results is that during this prolonged exposure to organic solvents the active-site fluorescent label inhibitor adopts a different binding conformation. Extrapolating this to an enzymatic reaction we argue that substrates bind in a less catalytically favorable conformation after the enzyme has been exposed to organic media for several hours. Published by Elsevier B.V.
引用
收藏
页码:38 / 44
页数:7
相关论文
共 35 条
[1]  
Bovara R, 1997, BIOTECHNOL BIOENG, V54, P50, DOI 10.1002/(SICI)1097-0290(19970405)54:1<50::AID-BIT6>3.0.CO
[2]  
2-X
[3]   Flexibility of enzymes suspended in organic solvents probed by time-resolved fluorescence anisotropy. Evidence that enzyme activity and enantioselectivity are directly related to enzyme flexibility [J].
Broos, J ;
Visser, AJWG ;
Engbersen, JFJ ;
Verboom, W ;
vanHoek, A ;
Reinhoudt, DN .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1995, 117 (51) :12657-12663
[4]   On the activity loss of hydrolases in organic solvents - I. Rapid loss of activity of a variety of enzymes and formulations in a range of organic solvents [J].
Castillo, B ;
Pacheco, Y ;
Al-Azzam, W ;
Griebenow, K ;
Devi, M ;
Ferrer, A ;
Barletta, G .
JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, 2005, 35 (4-6) :147-153
[5]   Effect of PEG modification on subtilisin Carlsberg activity, enantioselectivity, and structural dynamics in 1,4-dioxane [J].
Castillo, Betzaida ;
Sola, Ricardo J. ;
Ferrer, Amaris ;
Barletta, Gabriel ;
Griebenow, Kai .
BIOTECHNOLOGY AND BIOENGINEERING, 2008, 99 (01) :9-17
[6]   On the activity loss of hydrolases in organic solvents: II. a mechanistic study of subtilisin Carlsberg [J].
Castillo, Betzaida ;
Bansal, Vibha ;
Ganesan, Ashok ;
Halling, Peter ;
Secundo, Francesco ;
Ferrer, Amaris ;
Griebenow, Kai ;
Barletta, Gabriel .
BMC BIOTECHNOLOGY, 2006, 6 (1)
[7]  
Cruz A., 2009, MOL SIMULAT, P1
[8]   Effect of secondary structure on the activity of enzymes suspended in organic solvents [J].
Dong, AC ;
Meyer, JD ;
Kendrick, BS ;
Manning, MC ;
Carpenter, JF .
ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 1996, 334 (02) :406-414
[9]  
Eftink MR, 1991, METHOD BIOCHEM ANAL, V35, P127
[10]   Biocatalyst activity in nonaqueous environments correlates with centisecond-range protein motions [J].
Eppler, Ross K. ;
Hudson, Elton P. ;
Chase, Shannon D. ;
Dordick, Jonathan S. ;
Reimer, Jeffrey A. ;
Clark, Douglas S. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 (41) :15672-15677