Parasitic behavior in competing chemically fueled reaction cycles

被引:20
作者
Schwarz, Patrick S. [1 ]
Laha, Sudarshana [2 ,3 ]
Janssen, Jacqueline [2 ,3 ]
Huss, Tabea [1 ]
Boekhoven, Job [1 ,4 ]
Weber, Christoph A. [2 ,3 ]
机构
[1] Tech Univ Munich, Dept Chem, Lichtenbergstr 4, D-85748 Garching, Germany
[2] Max Planck Inst Phys Komplexer Syst, Biol Phys, Nothnitzer Str 38, D-01187 Dresden, Germany
[3] Ctr Syst Biol Dresden, Pfotenhauerstr 108, D-01307 Dresden, Germany
[4] Tech Univ Munich, Inst Adv Study, Lichtenbergstr 2a, D-85748 Garching, Germany
基金
欧洲研究理事会;
关键词
DRIVEN; SELECTION; DROPLETS;
D O I
10.1039/d1sc01106e
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Non-equilibrium, fuel-driven reaction cycles serve as model systems of the intricate reaction networks of life. Rich and dynamic behavior is observed when reaction cycles regulate assembly processes, such as phase separation. However, it remains unclear how the interplay between multiple reaction cycles affects the success of emergent assemblies. To tackle this question, we created a library of molecules that compete for a common fuel that transiently activates products. Often, the competition for fuel implies that a competitor decreases the lifetime of these products. However, in cases where the transient competitor product can phase-separate, such a competitor can increase the survival time of one product. Moreover, in the presence of oscillatory fueling, the same mechanism reduces variations in the product concentration while the concentration variations of the competitor product are enhanced. Like a parasite, the product benefits from the protection of the host against deactivation and increases its robustness against fuel variations at the expense of the robustness of the host. Such a parasitic behavior in multiple fuel-driven reaction cycles represents a lifelike trait, paving the way for the bottom-up design of synthetic life.
引用
收藏
页码:7554 / 7560
页数:7
相关论文
共 54 条
[1]   Parasitic Behavior of Self-Replicating Molecules [J].
Altay, Meniz ;
Altay, Yigit ;
Otto, Sijbren .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2018, 57 (33) :10564-10568
[2]   Existing Self-Replicators Can Direct the Emergence of New Ones [J].
Altay, Yigit ;
Altay, Meniz ;
Otto, Sijbren .
CHEMISTRY-A EUROPEAN JOURNAL, 2018, 24 (46) :11911-11915
[3]  
Bal S., 2019, ANGEW CHEM, V131, P250, DOI DOI 10.1002/ANGE.201811749
[4]  
Boekhoven J., 2010, Angew. Chemie, V122, P4935, DOI [10.1002/anie.201001511, DOI 10.1002/ANIE.201001511]
[5]   Transient assembly of active materials fueled by a chemical reaction [J].
Boekhoven, Job ;
Hendriksen, Wouter E. ;
Koper, Ger J. M. ;
Eelkema, Rienk ;
van Esch, Jan H. .
SCIENCE, 2015, 349 (6252) :1075-1079
[6]   Selection from a pool of self-assembling lipid replicators [J].
Colomer, Ignacio ;
Borissov, Arseni ;
Fletcher, Stephen P. .
NATURE COMMUNICATIONS, 2020, 11 (01)
[7]   Competition and Cooperation in Dynamic Replication Networks [J].
Dadon, Zehavit ;
Wagner, Nathaniel ;
Alasibi, Samaa ;
Samiappan, Manickasundaram ;
Mukherjee, Rakesh ;
Ashkenasy, Gonen .
CHEMISTRY-A EUROPEAN JOURNAL, 2015, 21 (02) :648-654
[8]   Regulating Chemically Fueled Peptide Assemblies by Molecular Design [J].
Dai, Kun ;
Fores, Jennifer Rodon ;
Wanzke, Caren ;
Winkeljann, Benjamin ;
Bergmann, Alexander M. ;
Lieleg, Oliver ;
Boekhoven, Job .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2020, 142 (33) :14142-14149
[9]   Dissipative Self-Assembly Driven by the Consumption of Chemical Fuels [J].
De, Soumen ;
Klajn, Rafal .
ADVANCED MATERIALS, 2018, 30 (41)
[10]   Transient DNA-Based Nanostructures Controlled by Redox Inputs [J].
Del Grosso, Erica ;
Prins, Leonard J. ;
Ricci, Francesco .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2020, 59 (32) :13238-13245