Integrated molecular analysis of the inactivation of a non-enveloped virus, feline calicivirus, by UV-C radiation

被引:17
作者
Tanaka, Tsuyoshi [1 ]
Nogariya, Osamu [1 ]
Shionoiri, Nozomi [1 ]
Maeda, Yoshiaki [1 ]
Arakaki, Atsushi [1 ]
机构
[1] Tokyo Univ Agr & Technol, Inst Engn, Div Biotechnol & Life Sci, 2-24-16 Naka Cho, Koganei, Tokyo 1848588, Japan
关键词
UV-C radiation; Feline calicivirus; Non-enveloped virus; RNA genome; Capsid protein; RNA DAMAGE; PROTEIN; IDENTIFICATION; MECHANISMS; NOROVIRUS; OXIDATION; CLEAVAGE; SEQUENCE; PCR;
D O I
10.1016/j.jbiosc.2018.01.018
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
UV-C treatment has been shown to be a powerful way to inactivate non-enveloped viruses in water samples. However, little is known about how the viruses were inactivated by UV-C radiation. In this study, we investigated the inactivation mechanism of a single-stranded RNA (ssRNA) non-enveloped virus, feline calicivirus (FCV), as a surrogate for the human norovirus, using UV-C radiation with different wavelengths. Integrated molecular analyses using RT-qPCR, sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), and mass spectrometry were employed to evaluate the extent of ssRNA genome and protein degradation. UV-C radiation of FCV efficiently impaired the infectivity of FCV in mammalian cells. We also identified degradation of the RNA genome, whose copy numbers decreased from 48% to 56% following UV255 or UV281 radiation. Significant degradation of capsid protein was not observed, whereas oxidation of amino acid residues in the major capsid protein VP-1 was determined. Our results suggest that damage to the RNA genome is primarily responsible for the observed decrease in FCV infectivity of CRFK cells. This study provides not only relevant baseline data but also an overview and possible mechanism for the disinfection of non-enveloped ssRNA viruses using UV-C radiation. (C) 2018, The Society for Biotechnology, Japan. All rights reserved.
引用
收藏
页码:63 / 68
页数:6
相关论文
共 26 条
[1]   SPECTROSCOPIC STUDIES ON THE PHOTOOXIDATION OF CALF-LENS GAMMA-CRYSTALLIN [J].
ANDLEY, UP ;
CLARK, BA .
CURRENT EYE RESEARCH, 1988, 7 (06) :571-579
[2]   Effects of cleaning and disinfection in reducing the spread of Norovirus contamination via environmental surfaces [J].
Barker, J ;
Vipond, IB ;
Bloomfield, SF .
JOURNAL OF HOSPITAL INFECTION, 2004, 58 (01) :42-49
[3]   Comparison of UV-Induced Inactivation and RNA Damage in MS2 Phage across the Germicidal UV Spectrum [J].
Beck, Sara E. ;
Rodriguez, Roberto A. ;
Hawkins, Michael A. ;
Hargy, Thomas M. ;
Larason, Thomas C. ;
Linden, Karl G. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2016, 82 (05) :1468-1474
[4]   Structural insights into calicivirus attachment and uncoating [J].
Bhella, David ;
Gatherer, Derek ;
Chaudhry, Yasmin ;
Pink, Rebecca ;
Goodfellow, Ian G. .
JOURNAL OF VIROLOGY, 2008, 82 (16) :8051-8058
[5]   The Cryo-Electron Microscopy Structure of Feline Calicivirus Bound to Junctional Adhesion Molecule A at 9-Angstrom Resolution Reveals Receptor-Induced Flexibility and Two Distinct Conformational Changes in the Capsid Protein VP1 [J].
Bhella, David ;
Goodfellow, Ian G. .
JOURNAL OF VIROLOGY, 2011, 85 (21) :11381-11390
[6]   Standardization of methods for fluence (UV dose) determination in bench-scale UV experiments [J].
Bolton, JR ;
Linden, KG .
JOURNAL OF ENVIRONMENTAL ENGINEERING-ASCE, 2003, 129 (03) :209-215
[7]   Mechanisms of Human Adenovirus Inactivation by Sunlight and UVC Light as Examined by Quantitative PCR and Quantitative Proteomics [J].
Bosshard, Franziska ;
Armand, Florence ;
Hamelin, Romain ;
Kohn, Tamar .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2013, 79 (04) :1325-1332
[8]   THE COMPLETE NUCLEOTIDE-SEQUENCE OF A FELINE CALICIVIRUS [J].
CARTER, MJ ;
MILTON, ID ;
MEANGER, J ;
BENNETT, M ;
GASKELL, RM ;
TURNER, PC .
VIROLOGY, 1992, 190 (01) :443-448
[9]   IDENTIFICATION AND SEQUENCE DETERMINATION OF THE CAPSID PROTEIN GENE OF FELINE CALICIVIRUS [J].
CARTER, MJ ;
MILTON, ID ;
TURNER, PC ;
MEANGER, J ;
BENNETT, M ;
GASKELL, RM .
ARCHIVES OF VIROLOGY, 1992, 122 (3-4) :223-235
[10]   Photoinduced, Family-Specific, Site-Selective Cleavage of TIM-Barrel Proteins [J].
Floyd, Nicola ;
Oldham, Neil J. ;
Eyles, Christopher J. ;
Taylor, Stephen ;
Filatov, Dmitry A. ;
Brouard, Mark ;
Davis, Benjamin G. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2009, 131 (35) :12518-+