Automated delineation of orbital abscess depicted on CT scan using deep learning
被引:16
作者:
Fu, Roxana
论文数: 0引用数: 0
h-index: 0
机构:
Univ Pittsburgh, Dept Ophthalmol, Pittsburgh, PA 15213 USAUniv Pittsburgh, Dept Ophthalmol, Pittsburgh, PA 15213 USA
Fu, Roxana
[1
]
Leader, Joseph K.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Pittsburgh, Dept Radiol, Pittsburgh, PA 15213 USA
Univ Pittsburgh, Dept Bioengn, Pittsburgh, PA 15213 USAUniv Pittsburgh, Dept Ophthalmol, Pittsburgh, PA 15213 USA
Leader, Joseph K.
[2
,3
]
Pradeep, Tejus
论文数: 0引用数: 0
h-index: 0
机构:
Johns Hopkins Univ, Sch Med, Baltimore, MD USAUniv Pittsburgh, Dept Ophthalmol, Pittsburgh, PA 15213 USA
Pradeep, Tejus
[4
]
Shi, Junli
论文数: 0引用数: 0
h-index: 0
机构:
Univ Pittsburgh, Dept Radiol, Pittsburgh, PA 15213 USA
Univ Pittsburgh, Dept Bioengn, Pittsburgh, PA 15213 USAUniv Pittsburgh, Dept Ophthalmol, Pittsburgh, PA 15213 USA
Shi, Junli
[2
,3
]
Meng, Xin
论文数: 0引用数: 0
h-index: 0
机构:
Univ Pittsburgh, Dept Radiol, Pittsburgh, PA 15213 USA
Univ Pittsburgh, Dept Bioengn, Pittsburgh, PA 15213 USAUniv Pittsburgh, Dept Ophthalmol, Pittsburgh, PA 15213 USA
Meng, Xin
[2
,3
]
Zhang, Yanchun
论文数: 0引用数: 0
h-index: 0
机构:
Univ Pittsburgh, Dept Radiol, Pittsburgh, PA 15213 USA
Univ Pittsburgh, Dept Bioengn, Pittsburgh, PA 15213 USAUniv Pittsburgh, Dept Ophthalmol, Pittsburgh, PA 15213 USA
Zhang, Yanchun
[2
,3
]
Pu, Jiantao
论文数: 0引用数: 0
h-index: 0
机构:
Univ Pittsburgh, Dept Radiol, Pittsburgh, PA 15213 USA
Univ Pittsburgh, Dept Bioengn, Pittsburgh, PA 15213 USAUniv Pittsburgh, Dept Ophthalmol, Pittsburgh, PA 15213 USA
Pu, Jiantao
[2
,3
]
机构:
[1] Univ Pittsburgh, Dept Ophthalmol, Pittsburgh, PA 15213 USA
[2] Univ Pittsburgh, Dept Radiol, Pittsburgh, PA 15213 USA
[3] Univ Pittsburgh, Dept Bioengn, Pittsburgh, PA 15213 USA
[4] Johns Hopkins Univ, Sch Med, Baltimore, MD USA
computed tomography;
deep learning;
orbital cellulitis;
segmentation;
SUBPERIOSTEAL ABSCESS;
SURGICAL-MANAGEMENT;
COMPLICATIONS;
SINUSITIS;
CRITERIA;
SEGMENTATION;
CELLULITIS;
VOLUME;
D O I:
10.1002/mp.14907
中图分类号:
R8 [特种医学];
R445 [影像诊断学];
学科分类号:
1002 ;
100207 ;
1009 ;
摘要:
Objectives To develop and validate a deep learning algorithm to automatically detect and segment an orbital abscess depicted on computed tomography (CT). Methods We retrospectively collected orbital CT scans acquired on 67 pediatric subjects with a confirmed orbital abscess in the setting of infectious orbital cellulitis. A context-aware convolutional neural network (CA-CNN) was developed and trained to automatically segment orbital abscess. To reduce the requirement for a large dataset, transfer learning was used by leveraging a pre-trained model for CT-based lung segmentation. An ophthalmologist manually delineated orbital abscesses depicted on the CT images. The classical U-Net and the CA-CNN models with and without transfer learning were trained and tested on the collected dataset using the 10-fold cross-validation method. Dice coefficient, Jaccard index, and Hausdorff distance were used as performance metrics to assess the agreement between the computerized and manual segmentations. Results The context-aware U-Net with transfer learning achieved an average Dice coefficient and Jaccard index of 0.78 +/- 0.12 and 0.65 +/- 0.13, which were consistently higher than the classical U-Net or the context-aware U-Net without transfer learning (P < 0.01). The average differences of the abscess between the computerized results and the experts in terms of volume and Hausdorff distance were 0.10 +/- 0.11 mL and 1.94 +/- 1.21 mm, respectively. The context-aware U-Net detected all orbital abscess without false positives. Conclusions The deep learning solution demonstrated promising performance in detecting and segmenting orbital abscesses on CT images in strong agreement with a human observer.
机构:
Boston Childrens Hosp, Dept Otolaryngol & Commun Enhancement, Boston, MA USA
Harvard Med Sch, Dept Otolaryngol, Boston, MA 02115 USABoston Childrens Hosp, Dept Otolaryngol & Commun Enhancement, Boston, MA USA
Adil, Eelam A.
;
Muir, Molly E.
论文数: 0引用数: 0
h-index: 0
机构:
Boston Childrens Hosp, Dept Otolaryngol & Commun Enhancement, Boston, MA USABoston Childrens Hosp, Dept Otolaryngol & Commun Enhancement, Boston, MA USA
Muir, Molly E.
;
Kawai, Kosuke
论文数: 0引用数: 0
h-index: 0
机构:
Boston Childrens Hosp, Dept Otolaryngol & Commun Enhancement, Boston, MA USABoston Childrens Hosp, Dept Otolaryngol & Commun Enhancement, Boston, MA USA
Kawai, Kosuke
;
Dombrowski, Natasha D.
论文数: 0引用数: 0
h-index: 0
机构:
Boston Childrens Hosp, Dept Otolaryngol & Commun Enhancement, Boston, MA USABoston Childrens Hosp, Dept Otolaryngol & Commun Enhancement, Boston, MA USA
Dombrowski, Natasha D.
;
Cunningham, Michael J.
论文数: 0引用数: 0
h-index: 0
机构:
Boston Childrens Hosp, Dept Otolaryngol & Commun Enhancement, Boston, MA USA
Harvard Med Sch, Dept Otolaryngol, Boston, MA 02115 USABoston Childrens Hosp, Dept Otolaryngol & Commun Enhancement, Boston, MA USA
机构:
Naval Med Ctr San Diego, Dept Otolaryngol Head & Neck Surg, San Diego, CA 92134 USANaval Med Ctr San Diego, Dept Otolaryngol Head & Neck Surg, San Diego, CA 92134 USA
Capra, Gregory
;
Liming, Bryan
论文数: 0引用数: 0
h-index: 0
机构:
Madigan Army Med Ctr, Dept Otolaryngol Head & Neck Surg, Tacoma, WA 98431 USANaval Med Ctr San Diego, Dept Otolaryngol Head & Neck Surg, San Diego, CA 92134 USA
Liming, Bryan
;
Boseley, Mark E.
论文数: 0引用数: 0
h-index: 0
机构:
Madigan Army Med Ctr, Dept Otolaryngol Head & Neck Surg, Tacoma, WA 98431 USANaval Med Ctr San Diego, Dept Otolaryngol Head & Neck Surg, San Diego, CA 92134 USA
Boseley, Mark E.
;
Brigger, Matthew T.
论文数: 0引用数: 0
h-index: 0
机构:
Naval Med Ctr San Diego, Dept Otolaryngol Head & Neck Surg, San Diego, CA 92134 USANaval Med Ctr San Diego, Dept Otolaryngol Head & Neck Surg, San Diego, CA 92134 USA
机构:
Med Coll Wisconsin, Dept Ophthalmol, Div Orbital & Ophthalm Plast Surg, Milwaukee, WI 53226 USAMed Coll Wisconsin, Dept Ophthalmol, Div Orbital & Ophthalm Plast Surg, Milwaukee, WI 53226 USA
Garcia, GH
;
Harris, GJ
论文数: 0引用数: 0
h-index: 0
机构:
Med Coll Wisconsin, Dept Ophthalmol, Div Orbital & Ophthalm Plast Surg, Milwaukee, WI 53226 USAMed Coll Wisconsin, Dept Ophthalmol, Div Orbital & Ophthalm Plast Surg, Milwaukee, WI 53226 USA
机构:
Assaf Harofeh Med Ctr, Dept Otolaryngol Head & Neck Surg, IL-70300 Zerifin, Israel
Tel Aviv Univ, Sackler Fac Med, Ramat Aviv, IsraelAssaf Harofeh Med Ctr, Dept Otolaryngol Head & Neck Surg, IL-70300 Zerifin, Israel
Gavriel, Haim
;
Yeheskeli, Eyal
论文数: 0引用数: 0
h-index: 0
机构:
Assaf Harofeh Med Ctr, Dept Otolaryngol Head & Neck Surg, IL-70300 Zerifin, Israel
Tel Aviv Univ, Sackler Fac Med, Ramat Aviv, IsraelAssaf Harofeh Med Ctr, Dept Otolaryngol Head & Neck Surg, IL-70300 Zerifin, Israel
Yeheskeli, Eyal
;
Aviram, Eliad
论文数: 0引用数: 0
h-index: 0
机构:
Assaf Harofeh Med Ctr, Dept Otolaryngol Head & Neck Surg, IL-70300 Zerifin, Israel
Tel Aviv Univ, Sackler Fac Med, Ramat Aviv, IsraelAssaf Harofeh Med Ctr, Dept Otolaryngol Head & Neck Surg, IL-70300 Zerifin, Israel
Aviram, Eliad
;
Yehoshua, Lior
论文数: 0引用数: 0
h-index: 0
机构:
Assaf Harofeh Med Ctr, Dept Otolaryngol Head & Neck Surg, IL-70300 Zerifin, Israel
Tel Aviv Univ, Sackler Fac Med, Ramat Aviv, IsraelAssaf Harofeh Med Ctr, Dept Otolaryngol Head & Neck Surg, IL-70300 Zerifin, Israel
Yehoshua, Lior
;
Eviatar, Ephraim
论文数: 0引用数: 0
h-index: 0
机构:
Assaf Harofeh Med Ctr, Dept Otolaryngol Head & Neck Surg, IL-70300 Zerifin, Israel
Tel Aviv Univ, Sackler Fac Med, Ramat Aviv, IsraelAssaf Harofeh Med Ctr, Dept Otolaryngol Head & Neck Surg, IL-70300 Zerifin, Israel
机构:
Boston Childrens Hosp, Dept Otolaryngol & Commun Enhancement, Boston, MA USA
Harvard Med Sch, Dept Otolaryngol, Boston, MA 02115 USABoston Childrens Hosp, Dept Otolaryngol & Commun Enhancement, Boston, MA USA
Adil, Eelam A.
;
Muir, Molly E.
论文数: 0引用数: 0
h-index: 0
机构:
Boston Childrens Hosp, Dept Otolaryngol & Commun Enhancement, Boston, MA USABoston Childrens Hosp, Dept Otolaryngol & Commun Enhancement, Boston, MA USA
Muir, Molly E.
;
Kawai, Kosuke
论文数: 0引用数: 0
h-index: 0
机构:
Boston Childrens Hosp, Dept Otolaryngol & Commun Enhancement, Boston, MA USABoston Childrens Hosp, Dept Otolaryngol & Commun Enhancement, Boston, MA USA
Kawai, Kosuke
;
Dombrowski, Natasha D.
论文数: 0引用数: 0
h-index: 0
机构:
Boston Childrens Hosp, Dept Otolaryngol & Commun Enhancement, Boston, MA USABoston Childrens Hosp, Dept Otolaryngol & Commun Enhancement, Boston, MA USA
Dombrowski, Natasha D.
;
Cunningham, Michael J.
论文数: 0引用数: 0
h-index: 0
机构:
Boston Childrens Hosp, Dept Otolaryngol & Commun Enhancement, Boston, MA USA
Harvard Med Sch, Dept Otolaryngol, Boston, MA 02115 USABoston Childrens Hosp, Dept Otolaryngol & Commun Enhancement, Boston, MA USA
机构:
Naval Med Ctr San Diego, Dept Otolaryngol Head & Neck Surg, San Diego, CA 92134 USANaval Med Ctr San Diego, Dept Otolaryngol Head & Neck Surg, San Diego, CA 92134 USA
Capra, Gregory
;
Liming, Bryan
论文数: 0引用数: 0
h-index: 0
机构:
Madigan Army Med Ctr, Dept Otolaryngol Head & Neck Surg, Tacoma, WA 98431 USANaval Med Ctr San Diego, Dept Otolaryngol Head & Neck Surg, San Diego, CA 92134 USA
Liming, Bryan
;
Boseley, Mark E.
论文数: 0引用数: 0
h-index: 0
机构:
Madigan Army Med Ctr, Dept Otolaryngol Head & Neck Surg, Tacoma, WA 98431 USANaval Med Ctr San Diego, Dept Otolaryngol Head & Neck Surg, San Diego, CA 92134 USA
Boseley, Mark E.
;
Brigger, Matthew T.
论文数: 0引用数: 0
h-index: 0
机构:
Naval Med Ctr San Diego, Dept Otolaryngol Head & Neck Surg, San Diego, CA 92134 USANaval Med Ctr San Diego, Dept Otolaryngol Head & Neck Surg, San Diego, CA 92134 USA
机构:
Med Coll Wisconsin, Dept Ophthalmol, Div Orbital & Ophthalm Plast Surg, Milwaukee, WI 53226 USAMed Coll Wisconsin, Dept Ophthalmol, Div Orbital & Ophthalm Plast Surg, Milwaukee, WI 53226 USA
Garcia, GH
;
Harris, GJ
论文数: 0引用数: 0
h-index: 0
机构:
Med Coll Wisconsin, Dept Ophthalmol, Div Orbital & Ophthalm Plast Surg, Milwaukee, WI 53226 USAMed Coll Wisconsin, Dept Ophthalmol, Div Orbital & Ophthalm Plast Surg, Milwaukee, WI 53226 USA
机构:
Assaf Harofeh Med Ctr, Dept Otolaryngol Head & Neck Surg, IL-70300 Zerifin, Israel
Tel Aviv Univ, Sackler Fac Med, Ramat Aviv, IsraelAssaf Harofeh Med Ctr, Dept Otolaryngol Head & Neck Surg, IL-70300 Zerifin, Israel
Gavriel, Haim
;
Yeheskeli, Eyal
论文数: 0引用数: 0
h-index: 0
机构:
Assaf Harofeh Med Ctr, Dept Otolaryngol Head & Neck Surg, IL-70300 Zerifin, Israel
Tel Aviv Univ, Sackler Fac Med, Ramat Aviv, IsraelAssaf Harofeh Med Ctr, Dept Otolaryngol Head & Neck Surg, IL-70300 Zerifin, Israel
Yeheskeli, Eyal
;
Aviram, Eliad
论文数: 0引用数: 0
h-index: 0
机构:
Assaf Harofeh Med Ctr, Dept Otolaryngol Head & Neck Surg, IL-70300 Zerifin, Israel
Tel Aviv Univ, Sackler Fac Med, Ramat Aviv, IsraelAssaf Harofeh Med Ctr, Dept Otolaryngol Head & Neck Surg, IL-70300 Zerifin, Israel
Aviram, Eliad
;
Yehoshua, Lior
论文数: 0引用数: 0
h-index: 0
机构:
Assaf Harofeh Med Ctr, Dept Otolaryngol Head & Neck Surg, IL-70300 Zerifin, Israel
Tel Aviv Univ, Sackler Fac Med, Ramat Aviv, IsraelAssaf Harofeh Med Ctr, Dept Otolaryngol Head & Neck Surg, IL-70300 Zerifin, Israel
Yehoshua, Lior
;
Eviatar, Ephraim
论文数: 0引用数: 0
h-index: 0
机构:
Assaf Harofeh Med Ctr, Dept Otolaryngol Head & Neck Surg, IL-70300 Zerifin, Israel
Tel Aviv Univ, Sackler Fac Med, Ramat Aviv, IsraelAssaf Harofeh Med Ctr, Dept Otolaryngol Head & Neck Surg, IL-70300 Zerifin, Israel