The complete chloroplast genome sequence of Phlegmariurus carinatus

被引：5

作者：

Luo, Ting ^{[1
]}

Li, Yunqing ^{[1
]}

Yuan, Xiaolong ^{[1
]}

Wang, Yi ^{[1
]}

机构：

[1] Yunnan Acad Forestry, Lab Forest Plant Cultivat & Utilizat, Kunming 650204, Yunnan, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 02期

关键词：

Phlegmariurus carinatus; chloroplast; Illumina sequencing; phylogenetic analysis; ALKALOIDS;

D O I：

10.1080/23802359.2019.1688720

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

The first complete chloroplast genome (cpDNA) sequence of Phlegmariurus carinatus was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 150,349 bp in length, contains a large single-copy region (LSC) of 100,582 bp and a small single-copy region (SSC) of 19,455 bp, which were separated by a pair of inverted repeat (IR) regions of 15,156 bp. The genome contains 120 genes, including 79 protein-coding genes, 8 ribosomal RNA genes, and 33 transfer RNA genes. The overall GC content of the whole genome is 34.0%, and the corresponding values of the LSC, SSC, and IR regions are 31.6%, 30.4%, and 44.2%, respectively. Further phylogenomic analysis showed that P. carinatus and Huperzia serrata clustered in a clade in family Lycopodiaceae.

引用

页码：3977 / 3978

页数：2

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