Splicing by cell type

被引：3

作者：

Arias, Mauricio A. ^{[1
]}

Ke, Shengdong ^{[1
]}

Chasin, Lawrence A. ^{[1
]}

机构：

[1] Columbia Univ, Dept Biol Sci, New York, NY 10027 USA

来源：

NATURE BIOTECHNOLOGY | 2010年 / 28卷 / 07期

关键词：

REGULATORY ELEMENTS; CODE;

D O I：

10.1038/nbt0710-686

中图分类号：

Q81 [生物工程学（生物技术）]; Q93 [微生物学];

学科分类号：

071005 ; 0836 ; 090102 ; 100705 ;

摘要：

A comprehensive study identifies sequence features that predict tissue-specific alternative splicing.

引用

页码：686 / 687

页数：2

共 10 条

[1] Deciphering the splicing code [J].

Barash, Yoseph ;

Calarco, John A. ;

Gao, Weijun ;

Pan, Qun ;

Wang, Xinchen ;

Shai, Ofer ;

Blencowe, Benjamin J. ;

Frey, Brendan J. .

NATURE, 2010, 465 (7294) :53-59

[2] Searching for splicing motifs [J].

Chasin, Lawrence A. .

ALTERNATIVE SPLICING IN THE POSTGENOMIC ERA, 2007, 623 :85-106

[3] A correlation with exon expression approach to identify cis-regulatory elements for tissue-specific alternative splicing [J].

Das, Debopriya ;

Clark, Tyson A. ;

Schweitzer, Anthony ;

Yamamoto, Miki ;

Marr, Henry ;

Arribere, Josh ;

Minovitsky, Simon ;

Poliakov, Alexander ;

Dubchak, Inna ;

Blume, John E. ;

Conboy, John G. .

NUCLEIC ACIDS RESEARCH, 2007, 35 (14) :4845-4857

[4] Towards a splicing code [J].

Fu, XD .

CELL, 2004, 119 (06) :736-738

[5] Regulation of Alternative Splicing by Histone Modifications [J].

Luco, Reini F. ;

Pan, Qun ;

Tominaga, Kaoru ;

Blencowe, Benjamin J. ;

Pereira-Smith, Olivia M. ;

Misteli, Tom .

SCIENCE, 2010, 327 (5968) :996-1000

[6] The carboxy terminal domain of RNA polymerase II and alternative splicing [J].

Munoz, Manuel J. ;

de la Mata, Manuel ;

Kornblihtt, Alberto R. .

TRENDS IN BIOCHEMICAL SCIENCES, 2010, 35 (09) :497-504

[7] Nucleosome positioning as a determinant of exon recognition [J].

Tilgner, Hagen ;

Nikolaou, Christoforos ;

Althammer, Sonja ;

Sammeth, Michael ;

Beato, Miguel ;

Valcarcel, Juan ;

Guigo, Roderic .

NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2009, 16 (09) :996-U124

[8]

Trifonov EN, 1996, COMPUT APPL BIOSCI, V12, P423

[9] Splicing regulation: From a parts list of regulatory elements to an integrated splicing code [J].

Wang, Zefeng ;

Burge, Christopher B. .

RNA, 2008, 14 (05) :802-813

[10] Genome-wide Analysis of PTB-RNA Interactions Reveals a Strategy Used by the General Splicing Repressor to Modulate Exon Inclusion or Skipping [J].

Xue, Yuanchao ;

Zhou, Yu ;

Wu, Tongbin ;

Zhu, Tuo ;

Ji, Xiong ;

Kwon, Young-Soo ;

Zhang, Chao ;

Yeo, Gene ;

Black, Douglas L. ;

Sun, Hui ;

Fu, Xiang-Dong ;

Zhang, Yi .

MOLECULAR CELL, 2009, 36 (06) :996-1006

← 1 →