Computational Modeling of PI3K/AKT and MAPK Signaling Pathways in Melanoma Cancer

被引:52
作者
Pappalardo, Francesco [1 ]
Russo, Giulia [1 ]
Candido, Saverio [2 ]
Pennisi, Marzio [3 ]
Cavalieri, Salvatore [4 ]
Motta, Santo [3 ]
McCubrey, James A. [5 ]
Nicoletti, Ferdinando [2 ]
Libra, Massimo [2 ]
机构
[1] Univ Catania, Dept Drug Sci, I-95125 Catania, Italy
[2] Univ Catania, Dept Biomed & Biotechnol Sci, I-95125 Catania, Italy
[3] Univ Catania, Dept Math & Comp Sci, I-95125 Catania, Italy
[4] Univ Catania, Dept Engn, I-95125 Catania, Italy
[5] E Carolina Univ, Brody Sch Med, Dept Microbiol & Immunol, Greenville, NC USA
来源
PLOS ONE | 2016年 / 11卷 / 03期
关键词
PHOSPHATIDYLINOSITOL; 3-KINASE; MUTATIONS; NEURONS;
D O I
10.1371/journal.pone.0152104
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background Malignant melanoma is an aggressive tumor of the skin and seems to be resistant to current therapeutic approaches. Melanocytic transformation is thought to occur by sequential accumulation of genetic and molecular alterations able to activate the Ras/Raf/MEK/ERK (MAPK) and/or the PI3K/AKT (AKT) signalling pathways. Specifically, mutations of B-RAF activate MAPK pathway resulting in cell cycle progression and apoptosis prevention. According to these findings, MAPK and AKT pathways may represent promising therapeutic targets for an otherwise devastating disease. Result Here we show a computational model able to simulate the main biochemical and metabolic interactions in the PI3K/AKT and MAPK pathways potentially involved in melanoma development. Overall, this computational approach may accelerate the drug discovery process and encourages the identification of novel pathway activators with consequent development of novel antioncogenic compounds to overcome tumor cell resistance to conventional therapeutic agents. The source code of the various versions of the model are available as S1 Archive.
引用
收藏
页数:10
相关论文
共 20 条
[11]   Analysis of BRAF mutation in primary and metastatic melanoma [J].
Libra, M ;
Malaponte, G ;
Navolanic, PM ;
Gangemi, P ;
Bevelacqua, V ;
Proietti, L ;
Bruni, B ;
Stivala, F ;
Mazzarino, MC ;
Travali, S ;
McCubrey, JA .
CELL CYCLE, 2005, 4 (10) :1382-1384
[12]   Ras/Raf/MEK/ERK and PI3K/PTEN/Akt/mTOR Cascade Inhibitors: How Mutations Can Result in Therapy Resistance and How to Overcome Resistance [J].
McCubrey, James A. ;
Steelman, Linda S. ;
Chappell, William H. ;
Abrams, Stephen L. ;
Franklin, Richard A. ;
Montalto, Giuseppe ;
Cervello, Melchiorre ;
Libra, Massimo ;
Candido, Saverio ;
Malaponte, Grazia ;
Mazzarino, Maria C. ;
Fagone, Paolo ;
Nicoletti, Ferdinando ;
Baesecke, Joerg ;
Mijatovic, Sanja ;
Maksimovic-Ivanic, Danijela ;
Milella, Michele ;
Tafuri, Agostino ;
Chiarini, Francesca ;
Evangelisti, Camilla ;
Cocco, Lucio ;
Martelli, Alberto M. .
ONCOTARGET, 2012, 3 (10) :1068-1111
[13]   Mechanisms of disease - Melanoma [J].
Miller, Arlo J. ;
Mihm, Martin C., Jr. .
NEW ENGLAND JOURNAL OF MEDICINE, 2006, 355 (01) :51-65
[14]   Mathematical and Computational Models in Tumor Immunology [J].
Pappalardo, F. ;
Palladini, A. ;
Pennisi, M. ;
Castiglione, F. ;
Motta, S. .
MATHEMATICAL MODELLING OF NATURAL PHENOMENA, 2012, 7 (03) :186-203
[15]   Phosphatidylinositol 3-kinase is a central mediator of NMDA receptor signalling to MAP kinase (Erk1/2), Akt/PKB and CREB in striatal neurones [J].
Perkinton, MS ;
Ip, JK ;
Wood, GL ;
Crossthwaite, AJ ;
Williams, RJ .
JOURNAL OF NEUROCHEMISTRY, 2002, 80 (02) :239-254
[16]   Genetic interaction between NRAS and BRAF mutations and PTEN/MMAC1 inactivation in melanoma [J].
Tsao, H ;
Goel, V ;
Wu, H ;
Yang, G ;
Haluska, FG .
JOURNAL OF INVESTIGATIVE DERMATOLOGY, 2004, 122 (02) :337-341
[17]  
Vennepureddy Adarsh, 2016, J Clin Med Res, V8, P63, DOI 10.14740/jocmr2424w
[18]   Current topics in melanoma [J].
Wolchok, Jedd D. ;
Saenger, Yvonne M. .
CURRENT OPINION IN ONCOLOGY, 2007, 19 (02) :116-120
[19]   Role of phosphoinositide 3-kinase and endocytosis in nerve growth factor-induced extracellular signal-regulated kinase activation via Ras and Rap1 [J].
York, RD ;
Molliver, DC ;
Grewal, SS ;
Stenberg, PE ;
McCleskey, EW ;
Stork, PJS .
MOLECULAR AND CELLULAR BIOLOGY, 2000, 20 (21) :8069-8083
[20]   Phosphatidylinositol 3-kinase activates ERK in primary sensory neurons and mediates inflammatory heat hyperalgesia through TRPV1 sensitization [J].
Zhuang, ZY ;
Xu, HX ;
Clapham, DE ;
Ji, RR .
JOURNAL OF NEUROSCIENCE, 2004, 24 (38) :8300-8309