High sensitivity and rapid detection of KRAS and BRAF gene mutations in colorectal cancer using YbTixOy electrolyte-insulator-semiconductor biosensors

被引:7
作者
Pan, Tung -Ming [1 ,2 ]
Liao, Pei-You [1 ]
机构
[1] Chang Gung Univ, Dept Elect Engn, Taoyuan 33302, Taiwan
[2] Chang Gung Mem Hosp, Linkou Med Ctr, Div Urol, Taoyuan City 33305, Taiwan
关键词
Available online xxx; Colorectal cancer (CRC); KRAS; BRAF; Gene mutation; Electrolyte-insulator-semiconductor (EIS); YbTi x O y; FIELD-EFFECT-TRANSISTOR; SENSING CHARACTERISTICS; DNA HYBRIDIZATION; EGFR THERAPY; HYSTERESIS; SURFACE; FET;
D O I
10.1016/j.mtchem.2022.100979
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The KRAS and BRAF genes are attractive for a predictive biomarker to determine whether the colorectal cancer (CRC) patient predicts response to anti-epidermal growth factor receptor treatment. The detection of KRAS and BRAF mutation statuses has to be considered as a diagnostic and prognostic factor for the treatment of metastatic CRC patients because the targeted therapy may be expensive as well as toxic. In this work, we develop an YbTixOy electrolyte-insulator-semiconductor (EIS) biosensor to detect the KRAS and BRAF gene mutations in CRC. X-ray diffraction, atomic force microscopy, X-ray photoelectron spectroscopy, and secondary ion mass spectrometry were used to explore the structural features of YbTixOy films prepared under three Ti plasma power conditions. We found that the YbTixOy-based EIS sensor fabricated at the 80 W condition exhibited a higher sensitivity of 69.54 mV/pH (in pH range 2 e12), a lower hysteresis voltage of 1 mV (in pH loop of 7->4->7->10->7), and a smaller drift rate of 0.15 mV/h (in pH 7) than those of the other Ti plasma power conditions. Furthermore, we successfully demonstrated that the single strain DNA probe-immobilized YbTixOy EIS biosensors functionalized with 3-aminopropyl triethoxysilane followed by glutaraldehyde were screened for the KRAS and BRAF gene mutations in CRC. High sensitivity and rapid detection of the YbTixOy-based EIS biosensor are expected to serve as the diagnostic tool for clinical examination and screening with CRC. (c) 2022 Elsevier Ltd. All rights reserved.
引用
收藏
页数:11
相关论文
共 32 条
[21]   Association of KRAS, NRAS, BRAF and PIK3CA gene mutations with clinicopathological features, prognosis and ring finger protein 215 expression in patients with colorectal cancer [J].
Wu, Jing-Bo ;
Li, Xiao-Jing ;
Liu, Hui ;
Liu, Yong-Juan ;
Liu, Xiu-Ping .
BIOMEDICAL REPORTS, 2023, 19 (06)
[22]   KRAS mutation detection and prognostic potential in sporadic colorectal cancer using high-resolution melting analysis [J].
Deschoolmeester, V. ;
Boeckx, C. ;
Baay, M. ;
Weyler, J. ;
Wuyts, W. ;
Van Marck, E. ;
Peeters, M. ;
Lardon, F. ;
Vermorken, J. B. .
BRITISH JOURNAL OF CANCER, 2010, 103 (10) :1627-1636
[23]   High sensitivity scanning of colorectal tumors and matched plasma DNA for mutations in APC, TP53, K-RAS, and BRAF genes with a novel DHPLC fluorescence detection platform [J].
Lilleberg, SL ;
Durocher, J ;
Sanders, C ;
Walters, K ;
Culver, K .
CIRCULATING NUCLEIC ACIDS IN PLASMA/SERUM III AND SERUM PROTEOMICS, 2004, 1022 :250-256
[24]   Label-free detection of uric acid using a disposable poly-N-isopropylacrylamide as an encapsulating enzyme material based on high-κ Eu2Ti2O7 electrolyte-insulator-semiconductor devices [J].
Pan, Tung-Ming ;
Chang, Kung-Yuan ;
Lin, Chao-Wen ;
Tsai, Shiao-Wen ;
Wu, Min-Hsien .
SENSORS AND ACTUATORS B-CHEMICAL, 2011, 160 (01) :850-857
[25]   Structural properties and sensing performance of high-k Nd2TiO5 thin layer-based electrolyte-insulator-semiconductor for pH detection and urea biosensing [J].
Pan, Tung-Ming ;
Lin, Jian-Chi ;
Wu, Min-Hsien ;
Lai, Chao-Sung .
BIOSENSORS & BIOELECTRONICS, 2009, 24 (09) :2864-2870
[26]   KRAS mutation detection and prognostic potential in sporadic colorectal cancer using high-resolution melting analysis [J].
V Deschoolmeester ;
C Boeckx ;
M Baay ;
J Weyler ;
W Wuyts ;
E Van Marck ;
M Peeters ;
F Lardon ;
J B Vermorken .
British Journal of Cancer, 2010, 103 :1627-1636
[27]   Extreme assay sensitivity in molecular diagnostics further unveils intratumour heterogeneity in metastatic colorectal cancer as well as artifactual low-frequency mutations in the KRAS gene [J].
Mariani, Sara ;
Bertero, Luca ;
Osella-Abate, Simona ;
Di Bello, Cristiana ;
di Celle, Paola Francia ;
Coppola, Vittoria ;
Sapino, Anna ;
Cassoni, Paola ;
Marchio, Caterina .
BRITISH JOURNAL OF CANCER, 2017, 117 (03) :358-366
[28]   Association of SIGLEC9 Expression with Cytokine Expression, Tumor Grading, KRAS, NRAS, BRAF, PIK3CA, AKT Gene Mutations, and MSI Status in Colorectal Cancer [J].
Ochman, Blazej ;
Kot, Anna ;
Mielcarska, Sylwia ;
Kula, Agnieszka ;
Dawidowicz, Miriam ;
Koszewska, Dominika ;
Hudy, Dorota ;
Szrot, Monika ;
Piecuch, Jerzy ;
Waniczek, Dariusz ;
Czuba, Zenon ;
Swietochowska, Elzbieta .
CURRENT ISSUES IN MOLECULAR BIOLOGY, 2024, 46 (12) :13617-13646
[29]   Molecular spectrum of KRAS, NRAS, BRAF, PIK3CA, TP53, and APC somatic gene mutations in Arab patients with colorectal cancer: determination of frequency and distribution pattern [J].
Al-Shamsi, Humaid O. ;
Jones, Jeremy ;
Fahmawi, Yazan ;
Dahbour, Ibrahim ;
Tabash, Aziz ;
Abdel-Wahab, Reham ;
Abousamra, Ahmed O. S. ;
Shaw, Kenna R. ;
Xiao, Lianchun ;
Hassan, Manal M. ;
Kipp, Benjamin R. ;
Kopetz, Scott ;
Soliman, Amr S. ;
McWilliams, Robert R. ;
Wolff, Robert A. .
JOURNAL OF GASTROINTESTINAL ONCOLOGY, 2016, 7 (06) :882-+
[30]   Development of high-k Tm2Ti2O7 sensing membrane-based electrolyte-insulator-semiconductor for pH detection and its application for glucose biosensing using poly(N-isopropylacrylamide) as an enzyme encapsulation material [J].
Wu, Min-Hsien ;
Lee, Yu-Fang ;
Lin, Chao-Wen ;
Tsai, Shiao-Wen ;
Wang, Hsin-Yao ;
Pan, Tung-Ming .
JOURNAL OF MATERIALS CHEMISTRY, 2011, 21 (02) :539-547