The complete chloroplast genome sequence of Sphagneticola trilobata (Asteraceae)

被引：0

作者：

Zhou, Yubing ^{[1
]}

Ng, Wei Lun ^{[1
]}

Zhou, Renchao ^{[1
]}

Wu, Wei ^{[1
]}

机构：

[1] Sun Yat Sen Univ, Sch Life Sci, Guangdong Prov Key Lab Plant Resources, State Key Lab Biocontrol, Guangzhou 510275, Guangdong, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2018年 / 3卷 / 02期

基金：

中国国家自然科学基金;

关键词：

Sphagneticola; Asteraceae; biological invasion; complete chloroplast genome; automated assembly;

D O I：

10.1080/23802359.2018.1483767

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

Sphagneticola trilobata is one of the world's worst invasive alien species. The paucity of genetic information for this species has made it difficult for studies on the underlying genetic mechanism of its invasiveness. Herein, we report the de novo chloroplast genome assembly of S. trilobata using Illumina whole-genome sequencing data. The chloroplast genome was 151,939bp in length, with a large single copy (LSC) region of 83,405bp, a small single copy (SSC) region of 18,448bp, separated by two inverted repeat (IR) regions of 25,044bp each. A total of 134 genes were annotated for the chloroplast genome assembly, including 86 protein-encoding genes. Phylogenetic analysis suggested close relationship between S. trilobata and Eclipta prostrata.

引用

页码：740 / 741

页数：2

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