Exploratory identification of predictive biomarkers in randomized trials with normal endpoints

被引:8
|
作者
Krzykalla, Julia [1 ,2 ]
Benner, Axel [1 ]
Kopp-Schneider, Annette [1 ]
机构
[1] German Canc Res Ctr, Div Biostat, Heidelberg, Germany
[2] Heidelberg Univ, Med Fak, Heidelberg, Germany
关键词
individual treatment effect; model-based recursive partitioning; modified covariates; predictive factors; random forests; AMYOTROPHIC-LATERAL-SCLEROSIS; SUBGROUP IDENTIFICATION; VARIABLE SELECTION; RILUZOLE; VALIDATION; TREES;
D O I
10.1002/sim.8452
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
One of the main endeavours in present-day medicine, especially in oncological research, is to provide evidence for individual treatment decisions ("stratified medicine"). In the pursuit of optimal treatment decision rules, the identification of predictive biomarkers that modify the treatment effect is essential. Proposed methods have often been based on recursive partitioning since a wide variety of interaction patterns can be captured automatically and the results are easily interpretable. Furthermore, these methods are readily extendable to high-dimensional settings by means of ensemble learning. In this article, we present predMOB, an adaptation of the model-based recursive partitioning (MOB) for subgroup analysis approach specifically tailored to the identification of predictive factors. In a simulation study, predMOB outperforms the original MOB with respect to the number of false detections and shows to be more robust in moderately complex settings. Furthermore, we compare the results of predMOB for the application to a public data base of amyotrophic lateral sclerosis patients to those obtained from the original MOB and are able to elucidate the nature of the biomarkers' effects.
引用
收藏
页码:923 / 939
页数:17
相关论文
共 50 条
  • [41] Efficacy endpoints (EEPs) in melanoma randomized controlled adjuvant trials (RCATs).
    Monzon, Jose Gerard
    Petrella, Teresa M.
    Dancey, Janet
    JOURNAL OF CLINICAL ONCOLOGY, 2012, 30 (15)
  • [42] Endpoints reported in phase 3 randomized clinical trials at ASCO 2022
    Teuwen, Laure-Anne Marie Nicole
    Young, Joanna Alyse
    Bourlon, Maria Teresa
    Segelov, Eva
    Prenen, Hans
    JOURNAL OF CLINICAL ONCOLOGY, 2023, 41 (16)
  • [43] Endpoints for randomized controlled clinical trials for COVID-19 treatments
    Dodd, Lori E.
    Follmann, Dean
    Wang, Jing
    Koenig, Franz
    Korn, Lisa L.
    Schoergenhofer, Christian
    Proschan, Michael
    Hunsberger, Sally
    Bonnett, Tyler
    Makowski, Mat
    Belhadi, Drifa
    Wang, Yeming
    Bin Cao
    Mentre, France
    Jaki, Thomas
    CLINICAL TRIALS, 2020, 17 (05) : 472 - 482
  • [44] Estimating sensitivity of exploratory cellular biomarkers in oncology clinical trials
    Xue, Chengsen
    Swenson, Christina D.
    Mc Closkey, Thomas W.
    CANCER RESEARCH, 2024, 84 (06)
  • [45] Randomized Clinical Trials With Biomarkers: Design Issues
    Freidlin, Boris
    McShane, Lisa M.
    Korn, Edward L.
    JOURNAL OF THE NATIONAL CANCER INSTITUTE, 2010, 102 (03) : 152 - 160
  • [46] A predictive probability interim design for phase II clinical trials with continuous endpoints
    Liu, Meng
    Dressler, Emily V.
    STATISTICS IN MEDICINE, 2018, 37 (12) : 1960 - 1972
  • [47] On study designs and hypotheses for clinical trials with predictive biomarkers
    Shih, Weichung J.
    Lin, Yong
    CONTEMPORARY CLINICAL TRIALS, 2017, 62 : 140 - 145
  • [48] Implementing prognostic and predictive biomarkers in CRC clinical trials
    Van Schaeybroeck, Sandra
    Allen, Wendy L.
    Turkington, Richard C.
    Johnston, Patrick G.
    NATURE REVIEWS CLINICAL ONCOLOGY, 2011, 8 (04) : 222 - 232
  • [49] Implementing prognostic and predictive biomarkers in CRC clinical trials
    Sandra Van Schaeybroeck
    Wendy L. Allen
    Richard C. Turkington
    Patrick G. Johnston
    Nature Reviews Clinical Oncology, 2011, 8 : 222 - 232
  • [50] Randomized Controlled Field Trials of Predictive Policing
    Mohler, G. O.
    Short, M. B.
    Malinowski, Sean
    Johnson, Mark
    Tita, G. E.
    Bertozzi, Andrea L.
    Brantingham, P. J.
    JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 2015, 110 (512) : 1399 - 1411