Molecular dynamics simulations to the bidirectional adhesion signaling pathway of integrin αVβ3

被引:18
作者
Kulke, Martin [1 ]
Langel, Walter [1 ]
机构
[1] Ernst Moritz Arndt Univ Greifswald, Inst Biochem, Felix Hausdorff Str 4, D-17487 Greifswald, Germany
关键词
dihedral principal component analysis; extracellular matrix; membrane protein; steered molecular dynamics; talin; CRYSTAL-STRUCTURE; STRUCTURAL BASIS; EXTRACELLULAR SEGMENT; FORCE-FIELD; OUTSIDE-IN; ACTIVATION; ALPHA-V-BETA-3; MECHANISMS; RECEPTOR; DOMAINS;
D O I
10.1002/prot.25849
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The bidirectional force transmission process of integrin through the cell membrane is still not well understood. Several possible mechanisms have been discussed in literature on the basis of experimental data, and in this study, we investigate these mechanisms by free and steered molecular dynamics simulations. For the first time, constant velocity pulling on the complete integrin molecule inside a dipalmitoyl-phosphatidylcholine membrane is conducted. From the results, the most likely mechanism for inside-out and outside-in signaling is the switchblade model with further separation of the transmembrane helices.
引用
收藏
页码:679 / 688
页数:10
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