Updated Comprehensive Phylogenetic Tree of Global Human Mitochondrial DNA Variation

被引:1396
作者
van Oven, Mannis [1 ]
Kayser, Manfred [1 ]
机构
[1] Erasmus Univ, Med Ctr Rotterdam, Dept Forens Mol Biol, NL-3000 CA Rotterdam, Netherlands
关键词
mitochondrial DNA; phylogenetic tree; haplogroup; mtDNA variation; human evolution; MTDNA HAPLOGROUP-H; Y-CHROMOSOME; PHYLOGEOGRAPHIC ANALYSIS; EVOLUTIONARY HISTORY; POPULATION-STRUCTURE; SETTLEMENT; SEQUENCE; EASTERN; ASIA; POLYMORPHISMS;
D O I
10.1002/humu.20921
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Human mitochondrial DNA is widely used as tool in many fields including evolutionary anthropology and population history, medical genetics, genetic genealogy, and forensic science. Many applications require detailed knowledge about the phylogenetic relationship of mtDNA variants. Although the phylogenetic resolution of global human mtDNA diversity has greatly improved as a result of increasing sequencing efforts of complete mtDNA genomes, an updated overall mtDNA tree is currently not available. In order to facilitate a better use of known mtDNA variation, we have constructed an updated comprehensive phylogeny of global human mtDNA variation, based on both coding- and control region mutations. This complete mtDNA tree includes previously published as well as newly identified haplogroups, is easily navigable, will be continuously and regularly updated in the future, and is online available at http://www.phylotree.org. (C) 2008 Wiley-Liss, Inc.
引用
收藏
页码:E386 / E394
页数:9
相关论文
共 86 条
  • [1] Mitochondrial DNA structure in the Arabian Peninsula
    Abu-Amero, Khaled K.
    Larruga, Jose M.
    Cabrera, Vicente M.
    Gonzalez, Ana M.
    [J]. BMC EVOLUTIONARY BIOLOGY, 2008, 8 (1)
  • [2] Eurasian and African mitochondrial DNA influences in the Saudi Arabian population
    Abu-Amero, Khaled K.
    Gonzalez, Ana M.
    Larruga, Jose M.
    Bosley, Thomas M.
    Cabrera, Vicente M.
    [J]. BMC EVOLUTIONARY BIOLOGY, 2007, 7
  • [3] The molecular dissection of mtDNA haplogroup H confirms that the Franco-Cantabrian glacial refuge was a major source for the European gene pool
    Achilli, A
    Rengo, C
    Magri, C
    Battaglia, V
    Olivieri, A
    Scozzari, R
    Cruciani, F
    Zeviani, M
    Briem, E
    Carelli, V
    Moral, P
    Dugoujon, JM
    Roostalu, U
    Loogväli, EL
    Kivisild, T
    Bandelt, HJ
    Richards, M
    Villems, R
    Santachiara-Benerecetti, AS
    Semino, O
    Torroni, A
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2004, 75 (05) : 910 - 918
  • [4] Saami and Berbers - An unexpected mitochondrial DNA link
    Achilli, A
    Rengo, C
    Battaglia, V
    Pala, M
    Olivieri, A
    Fornarino, S
    Magri, C
    Scozzari, R
    Babudri, N
    Santachiara-Benerecetti, AS
    Bandelt, HJ
    Semino, O
    Torroni, A
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2005, 76 (05) : 883 - 886
  • [5] The Phylogeny of the Four Pan-American MtDNA Haplogroups: Implications for Evolutionary and Disease Studies
    Achilli, Alessandro
    Perego, Ugo A.
    Bravi, Claudio M.
    Coble, Michael D.
    Kong, Qing-Peng
    Woodward, Scott R.
    Salas, Antonio
    Torroni, Antonio
    Bandelt, Hans-Juergen
    [J]. PLOS ONE, 2008, 3 (03):
  • [6] ALVAREZIGLESIAS V, 2007, GENETICS, V1, P44
  • [7] SEQUENCE AND ORGANIZATION OF THE HUMAN MITOCHONDRIAL GENOME
    ANDERSON, S
    BANKIER, AT
    BARRELL, BG
    DEBRUIJN, MHL
    COULSON, AR
    DROUIN, J
    EPERON, IC
    NIERLICH, DP
    ROE, BA
    SANGER, F
    SCHREIER, PH
    SMITH, AJH
    STADEN, R
    YOUNG, IG
    [J]. NATURE, 1981, 290 (5806) : 457 - 465
  • [8] Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA
    Andrews, RM
    Kubacka, I
    Chinnery, PF
    Lightowlers, RN
    Turnbull, DM
    Howell, N
    [J]. NATURE GENETICS, 1999, 23 (02) : 147 - 147
  • [9] Consistent treatment of length variants in the human mtDNA control region: a reappraisal
    Bandelt, H. -J.
    Parson, W.
    [J]. INTERNATIONAL JOURNAL OF LEGAL MEDICINE, 2008, 122 (01) : 11 - 21
  • [10] Bandelt HJ, 2006, NUCL ACID M, V18, P47