Emergent Complexity from Simple Anisotropic Building Blocks: Shells, Tubes, and Spirals

被引:50
作者
Fejer, Szilard N. [1 ]
Chakrabarti, Dwaipayan [1 ]
Wales, David J. [1 ]
机构
[1] Univ Chem Labs, Cambridge CB2 1EW, England
关键词
virus capsid; self-assembly; mesoscopic; chiral tubes; helices; spirals; shells; MOSAIC-VIRUS; ENERGY LANDSCAPES; CAPSID PROTEIN; POLYMORPHISM; MECHANISM; PEPTIDE;
D O I
10.1021/nn9013565
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
We describe a remarkably simple, generic, coarse-grained model involving anisotropic interactions, and characterize the global minima for clusters as a function of various parameters. Appropriate choices for the anisotropic interactions can reproduce a wide variety of complex morphologies as global minima, including spheroidal shells, tubular, helical and even head-tail morphologies, elucidating the physical principles that drive the assembly of these mesoscopic structures. Our model captures several experimental observations, such as the existence of competing morphologies, capsid polymorphism, and the effect of scaffolding proteins on capsid assembly.
引用
收藏
页码:219 / 228
页数:10
相关论文
共 42 条
  • [11] STRUCTURE OF THE TOP A-T COMPONENT OF ALFALFA MOSAIC-VIRUS - A NON-ICOSAHEDRAL VIRION
    CUSACK, S
    OOSTERGETEL, GT
    KRIJGSMAN, PCJ
    MELLEMA, JE
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1983, 171 (02) : 139 - 155
  • [12] Scaffolding proteins and their role in viral assembly
    Dokland, T
    [J]. CELLULAR AND MOLECULAR LIFE SCIENCES, 1999, 56 (7-8) : 580 - 603
  • [13] STATES OF AGGREGATION OF TOBACCO MOSAIC VIRUS PROTEIN
    DURHAM, ACH
    FINCH, JT
    KLUG, A
    [J]. NATURE-NEW BIOLOGY, 1971, 229 (02): : 37 - +
  • [14] THE DISTRIBUTION OF POINT CHARGES ON THE SURFACE OF A SPHERE
    EDMUNDSON, JR
    [J]. ACTA CRYSTALLOGRAPHICA SECTION A, 1992, 48 : 60 - 69
  • [15] Folding of the GB1 hairpin peptide from discrete path sampling
    Evans, DA
    Wales, DJ
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2004, 121 (02) : 1080 - 1090
  • [16] Energy landscapes for shells assembled from pentagonal and hexagonal pyramids
    Fejer, Szilard N.
    James, Tim R.
    Hernandez-Rojas, Javier
    Wales, David J.
    [J]. PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2009, 11 (12) : 2098 - 2104
  • [17] Flint S.J., 2000, PRINCIPLES VIROLOGY
  • [18] Anisotropy of building blocks and their assembly into complex structures
    Glotzer, Sharon C.
    Solomon, Michael J.
    [J]. NATURE MATERIALS, 2007, 6 (08) : 557 - 562
  • [19] Theory of conformational transitions of viral shells
    Guerin, Thomas
    Bruinsma, Robijn
    [J]. PHYSICAL REVIEW E, 2007, 76 (06):
  • [20] Dynamic pathways for viral capsid assembly
    Hagan, Michael F.
    Chandler, David
    [J]. BIOPHYSICAL JOURNAL, 2006, 91 (01) : 42 - 54