Plasticity of mouse renal collecting duct in response to potassium depletion

被引:25
作者
Cheval, L
Van Huyen, JPD
Bruneval, P
Verbavatz, JM
Elalouf, JM
Doucet, A
机构
[1] Inst Biomed Cordeliers, Lab Physiol & Genom Renales, Unite Mixte Rech Ctr Natl Rech Sci UPMC 7134, F-75270 Paris 6, France
[2] Inst Biomed Cordeliers, Grp Anatomopathol, INSERM, U430,IFR 58, F-75270 Paris 6, France
[3] CEA Saclay, Dept Biol Joliot Curie, F-91191 Gif Sur Yvette, France
关键词
transcriptome; serial analysis of gene expression; kidney collecting duct; hypertrophy; hyperplasia;
D O I
10.1152/physiolgenomics.00055.2004
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Renal collecting ducts are the main sites for regulation of whole body potassium balance. Changes in dietary intake of potassium induce pleiotropic adaptations of collecting duct cells, which include alterations of ion and water transport properties along with an hypertrophic response. To study the pleiotropic adaptation of the outer medullary collecting duct (OMCD) to dietary potassium depletion, we combined functional studies of renal function ( ion, water, and acid/base handling), analysis of OMCD hypertrophy ( electron microscopy) and hyperplasia ( PCNA labeling), and large scale analysis of gene expression ( transcriptome analysis). The transcriptome of OMCD was compared in mice fed either a normal or a potassium-depleted diet for 3 days using serial analysis of gene expression ( SAGE) adapted for downsized extracts. SAGE is based on the generation of transcript-specific tag libraries. Approximately 20,000 tags corresponding to 10,000 different molecular species were sequenced in each library. Among the 186 tags differentially expressed ( P < 0.05) between the two libraries, 120 were overexpressed and 66 were downregulated. The SAGE expression profile obtained in the control library was representative of different functional classes of proteins and of the two cell types ( principal and alpha-intercalated cells) constituting the OMCD. Combined with gene expression analysis, results of functional and morphological studies allowed us to identify candidate genes for distinct physiological processes modified by potassium depletion: sodium, potassium, and water handling, hyperplasia and hypertrophy. Finally, comparison of mouse and human OMCD transcriptomes allowed us to address the question of the relevance of the mouse as a model for human physiology and pathophysiology.
引用
收藏
页码:61 / 73
页数:13
相关论文
共 63 条
  • [1] Plasticity in epithelial polarity of renal intercalated cells: Targeting of the H+-ATPase and band 3
    AlAwqati, Q
    [J]. AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY, 1996, 270 (06): : C1571 - C1580
  • [2] ARED 2.0: an update of AU-rich element mRNA database
    Bakheet, T
    Williams, BRG
    Khabar, KSA
    [J]. NUCLEIC ACIDS RESEARCH, 2003, 31 (01) : 421 - 423
  • [3] Identification of the gene causing mucolipidosis type IV
    Bargal, R
    Avidan, N
    Ben-Asher, E
    Olender, Z
    Zeigler, M
    Frumkin, A
    Raas-Rothschild, A
    Glusman, G
    Lancet, D
    Bach, G
    [J]. NATURE GENETICS, 2000, 26 (01) : 118 - 121
  • [4] MIC-1, a novel macrophage inhibitory cytokine, is a divergent member of the TGF-beta superfamily
    Bootcov, MR
    Bauskin, AR
    Valenzuela, SM
    Moore, AG
    Bansal, M
    He, XY
    Zhang, HP
    Donnellan, M
    Mahler, S
    Pryor, K
    Walsh, BJ
    Nicholson, RC
    Fairlie, WD
    Por, SB
    Robbins, JM
    Breit, SN
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (21) : 11514 - 11519
  • [5] Buffin-Meyer B, 1998, J AM SOC NEPHROL, V9, P538
  • [6] Definition of the tumor protein D52 (TPD52) gene family through cloning of D52 homologues in human (hD53) and mouse (mD52)
    Byrne, JA
    Mattei, MG
    Basset, P
    [J]. GENOMICS, 1996, 35 (03) : 523 - 532
  • [7] A panoramic view of gene expression in the human kidney
    Chabardès-Garonne, D
    Méjean, A
    Aude, JC
    Cheval, L
    Di Stefano, A
    Gaillard, MC
    Imbert-Teboul, M
    Wittner, M
    Balian, C
    Anthouard, V
    Roberts, C
    Ségurens, B
    Wincker, P
    Weissenbach, J
    Doucet, A
    Elalouf, JM
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (23) : 13710 - 13715
  • [8] Cindolo L, 2001, Minerva Urol Nefrol, V53, P211
  • [9] COLONY BANK CONTAINING SYNTHETIC COL EL HYBRID PLASMIDS REPRESENTATIVE OF ENTIRE ESCHERICHIA-COLI GENOME
    CLARKE, L
    CARBON, J
    [J]. CELL, 1976, 9 (01) : 91 - 99
  • [10] PIM3 proto-oncogene kinase is a common transcriptional target of divergent EWS/IETS oncoproteins
    Deneen, B
    Welford, SM
    Ho, T
    Hernandez, F
    Kurland, I
    Denny, CT
    [J]. MOLECULAR AND CELLULAR BIOLOGY, 2003, 23 (11) : 3897 - 3908