Molecular modeling analyses for the effect of solvents on amino acids

被引:5
|
作者
Bayoumy, Ahmed M. [1 ]
Badry, Rania [2 ]
Gaber, Heba A. [3 ]
Elbiomy, Sarah A. [1 ]
El Gabaly, Shimaa G. [4 ]
Abd ElAziz, Mariam Sayed [5 ]
Gouda, Shrouk Mohamed [6 ]
Elhaes, Hanan [2 ]
Yahia, Ibrahim S. [7 ,8 ,9 ]
Zahran, Heba Y. [7 ,8 ,9 ]
Ibrahim, Medhat [10 ]
机构
[1] Ain Shams Univ, Fac Sci, Phys Dept, Biophys Branch, Cairo 11566, Egypt
[2] Ain Shams Univ, Fac Women Arts Sci & Educ, Phys Dept, Cairo 11757, Egypt
[3] Res Inst Ophthalmol, Biophys & Laser Sci Unit, 2 Al Ahram Str, Giza 12111, Egypt
[4] Cairo Higher Inst Engn, Comp Sci & Mangement, Basic Sci Dept, 11477-57 SB EG, Cairo, Egypt
[5] Ain Shams Univ, Fac Sci, Biochem Chem Program, Cairo 11566, Egypt
[6] Ain Shams Univ, Fac Sci, Appl Biotechnol Program, Cairo 11566, Egypt
[7] King Khalid Univ, RCAMS, POB 9004, Abha 61413, Saudi Arabia
[8] King Khalid Univ, Fac Sci, Dept Phys, AFMOL, POB 9004, Abha, Saudi Arabia
[9] Ain Shams Univ, Fac Educ, Phys Dept 2, Semicond Lab,Met Lab,NLEBA, Cairo 11757, Egypt
[10] Natl Res Ctr, Spect Dept, 33 El Bohouth Str, Giza 12622, Egypt
来源
BIOINTERFACE RESEARCH IN APPLIED CHEMISTRY | 2019年 / 9卷 / 05期
关键词
Amino acids; Histidine; Arginine; Solvation; DFT; Geometrical parameters; CHARGE-TRANSFER COMPLEX; SPECTROSCOPIC CHARACTERIZATION; 2ND-HARMONIC GENERATION; CRYSTALLINE PERFECTION; ELECTRONIC-PROPERTIES; HISTIDINE; ADSORPTION; MECHANISM;
D O I
10.33263/BRIAC95.379383
中图分类号
O69 [应用化学];
学科分类号
081704 ;
摘要
Influence of solvation with various solvents is a vital issue for several applications of amino acids. Considering the impact of solvents and many other factors is an important point of research to get much more accurate data on their behavior. Hence, molecular modeling calculations were conducted for some amino acids in both cases; gaseous state and under the effect of several solvents; DMSO, acetonitrile, nitromethane, and methanol. DFT was utilized at B3LYP theoretical level and 6-31G(d,p) as a basis set. Geometrical parameters of both amino and carboxyl terminals were studied. Resulting data ascertain that various solvation processes impact the interested parameters that have to be considered for further applications.
引用
收藏
页码:4379 / 4383
页数:5
相关论文
共 50 条
  • [1] On the Molecular Modeling Analyses for the Effect of Hydrated Dioxin Upon Organic Acids
    Atta, Diaa
    Gomaa, Fathia
    Elhaes, Hanan
    Ibrahim, Medhat
    ENERGY AND ENVIRONMENT FOCUS, 2016, 5 (04) : 295 - 298
  • [2] Synthesis of peptides using free amino acids. The effect of inorganic compounds on the solubility of amino acids in aprotic solvents
    Ryadnov, MG
    Kashparova, NY
    Kashparov, IA
    Mitin, YV
    BIOORGANICHESKAYA KHIMIYA, 1998, 24 (06): : 408 - 411
  • [3] NATURE OF AMINO ACIDS IN SOLVENTS OF LOW DIELECTRIC
    BARROW, GM
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1958, 80 (01) : 86 - 88
  • [4] METHODS OF ANALYSES FOR SULFUR AMINO ACIDS
    HACKLER, LR
    FEEDSTUFFS, 1971, 43 (09): : 18 - &
  • [5] Modeling of properties of amino acids with random, semirandom, and molecular connectivity descriptors
    Pogliani, Lionello
    INTERNATIONAL JOURNAL OF QUANTUM CHEMISTRY, 2012, 112 (10) : 2267 - 2274
  • [6] Effect of the molecular structure on the enthalpies of hydration of amino acids and oligopeptides
    Badelin, VG
    Smirnov, VI
    Mezhevoi, IN
    RUSSIAN JOURNAL OF PHYSICAL CHEMISTRY, 2002, 76 (07): : 1168 - 1171
  • [7] Effect of the molecular structure on the enthalpies of hydration of amino acids and oligopeptides
    Badelin, V.G.
    Smirnov, V.I.
    Mezhevoj, I.N.
    Zhurnal Fizicheskoj Khimii, 2002, 76 (07): : 1299 - 1303
  • [8] Molecular modeling analyses for the effect of alkali metal oxides on graphene
    Ibrahim, Medhat A.
    Elhaes, Hanan
    El-Khodary, Sherif A.
    Morsy, Mohamed
    Refaat, Ahmed
    Yahia, Ibrahim S.
    Zahran, Heba Y.
    BIOINTERFACE RESEARCH IN APPLIED CHEMISTRY, 2018, 8 (05): : 3522 - 3525
  • [9] The calculation of physical properties of amino acids using molecular modeling techniques (II)
    Lee, MJ
    Kim, UR
    BULLETIN OF THE KOREAN CHEMICAL SOCIETY, 2004, 25 (07): : 1046 - 1050
  • [10] Spectroscopic Analyses of Chitosan Interactions with Amino Acids
    Ibrahim, Medhat A.
    Gawad, Alaa El-Din A.
    JOURNAL OF COMPUTATIONAL AND THEORETICAL NANOSCIENCE, 2012, 9 (08) : 1120 - 1124