Oligonucleotide ligation assay for detecting mutations in the human immunodeficiency virus type 1 pol gene that are associated with resistance to zidovudine, didanosine, and lamivudine

被引:64
作者
Edelstein, RE
Nickerson, DA
Tobe, VO
Manns-Arcuino, LA
Frenkel, LM
机构
[1] Univ Washington, Dept Pediat, Div Infect Dis, Seattle, WA 98195 USA
[2] Univ Washington, Dept Mol Biotechnol, Seattle, WA 98195 USA
关键词
D O I
10.1128/JCM.36.2.569-572.1998
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
This report describes the detection of mutations in the pol gene of human immunodeficiency virus type 1 associated with resistance to zidovudine, didanosine, and lamivudine by genotyping by an oligonucleotide ligation assay specific codons in the pol gene amplified by PCR. Our studies demonstrate the sensitivity, simplicity, and specificity of this genotyping system.
引用
收藏
页码:569 / 572
页数:4
相关论文
共 14 条
[1]   RAPID AND SIMPLE METHOD FOR PURIFICATION OF NUCLEIC-ACIDS [J].
BOOM, R ;
SOL, CJA ;
SALIMANS, MMM ;
JANSEN, CL ;
WERTHEIMVANDILLEN, PME ;
VANDERNOORDAA, J .
JOURNAL OF CLINICAL MICROBIOLOGY, 1990, 28 (03) :495-503
[2]   Human immunodeficiency virus type 1 drug susceptibility determination by using recombinant viruses generated from patient sera tested in a cell-killing assay [J].
Boucher, CAB ;
Keulen, W ;
vanBommel, T ;
Nijhuis, M ;
DeJong, D ;
DeJong, MD ;
Schipper, P ;
Back, NKT .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 1996, 40 (10) :2404-2409
[3]   BIOLOGICAL AND BIOCHEMICAL-CHARACTERIZATION OF A CLONED LEU-3- CELL SURVIVING INFECTION WITH THE ACQUIRED-IMMUNE-DEFICIENCY-SYNDROME RETROVIRUS [J].
FOLKS, TM ;
POWELL, D ;
LIGHTFOOTE, M ;
KOENIG, S ;
FAUCI, AS ;
BENN, S ;
RABSON, A ;
DAUGHERTY, D ;
GENDELMAN, HE ;
HOGGAN, MD ;
VENKATESAN, S ;
MARTIN, MA .
JOURNAL OF EXPERIMENTAL MEDICINE, 1986, 164 (01) :280-290
[4]   SPECIFIC, SENSITIVE, AND RAPID ASSAY FOR HUMAN-IMMUNODEFICIENCY-VIRUS TYPE-1 POL MUTATIONS ASSOCIATED WITH RESISTANCE TO ZIDOVUDINE AND DIDANOSINE [J].
FRENKEL, LM ;
WAGNER, LE ;
ATWOOD, SM ;
CUMMINS, TJ ;
DEWHURST, S .
JOURNAL OF CLINICAL MICROBIOLOGY, 1995, 33 (02) :342-347
[5]   STANDARDIZED PERIPHERAL-BLOOD MONONUCLEAR CELL-CULTURE ASSAY FOR DETERMINATION OF DRUG SUSCEPTIBILITIES OF CLINICAL HUMAN-IMMUNODEFICIENCY-VIRUS TYPE-1 ISOLATES [J].
JAPOUR, AJ ;
MAYERS, DL ;
JOHNSON, VA ;
KURITZKES, DR ;
BECKETT, LA ;
ARDUINO, JM ;
LANE, J ;
BLACK, RJ ;
REICHELDERFER, PS ;
DAQUILA, RT ;
CRUMPACKER, CS ;
BALFOUR, H ;
ERICE, A ;
COOMBS, R ;
KATZENSTEIN, D ;
LATHEY, J ;
RICHMAN, D ;
MCINTOSH, K ;
RANGAN, S ;
REICHMAN, R ;
SCOTT, W ;
USSERY, M ;
ABRAMS, L ;
MCCUTCHAN, F ;
BURKE, D ;
GARDNER, L ;
ROBERTS, C ;
CHUNG, R ;
HICKS, C ;
SHELLIE, E ;
FOWLER, A ;
MERRITT, L ;
FUJIMURAJUSTICE, M ;
RUIZ, N ;
WAGNER, K ;
GAIL, M .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 1993, 37 (05) :1095-1101
[6]   A MICROTITRE FORMAT POINT MUTATION ASSAY - APPLICATION TO THE DETECTION OF DRUG-RESISTANCE IN HUMAN-IMMUNODEFICIENCY-VIRUS TYPE-1 INFECTED PATIENTS TREATED WITH ZIDOVUDINE [J].
KAYE, S ;
LOVEDAY, C ;
TEDDER, RS .
JOURNAL OF MEDICAL VIROLOGY, 1992, 37 (04) :241-246
[7]   A LIGASE-MEDIATED GENE DETECTION TECHNIQUE [J].
LANDEGREN, U ;
KAISER, R ;
SANDERS, J ;
HOOD, L .
SCIENCE, 1988, 241 (4869) :1077-1080
[8]   CONVERGENT COMBINATION THERAPY CAN SELECT VIABLE MULTIDRUG-RESISTANT HIV-1 IN-VITRO [J].
LARDER, BA ;
KELLAM, P ;
KEMP, SD .
NATURE, 1993, 365 (6445) :451-453
[9]   ZIDOVUDINE RESISTANCE PREDICTED BY DIRECT DETECTION OF MUTATIONS IN DNA FROM HIV-INFECTED LYMPHOCYTES [J].
LARDER, BA ;
KELLAM, P ;
KEMP, SD .
AIDS, 1991, 5 (02) :137-144
[10]   AUTOMATED DNA DIAGNOSTICS USING AN ELISA-BASED OLIGONUCLEOTIDE LIGATION ASSAY [J].
NICKERSON, DA ;
KAISER, R ;
LAPPIN, S ;
STEWART, J ;
HOOD, L ;
LANDEGREN, U .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1990, 87 (22) :8923-8927