Dynamic spatio-temporal models for spatial data

被引:31
作者
Hefley, Trevor J. [1 ]
Hooten, Mevin B. [2 ]
Hanks, Ephraim M. [3 ]
Russell, Robin E. [4 ]
Walsh, Daniel P. [4 ]
机构
[1] Kansas State Univ, Dept Stat, Manhattan, KS 66506 USA
[2] Colorado State Univ, US Geol Survey, Dept Fish Wildlife & Conservat Biol, Dept Stat,Colorado Cooperat Fish & Wildlife Res U, Ft Collins, CO 80523 USA
[3] Penn State Univ, Dept Stat, University Pk, PA 16802 USA
[4] US Geol Survey, Natl Wildlife Hlth Ctr, Madison, WI USA
基金
美国国家科学基金会;
关键词
Ecological diffusion; Generalized linear mixed model; Homogenization Partial differential equations; Spatial confounding; Spatial statistics; CHRONIC WASTING DISEASE; EXPERT OPINION; MULE DEER; SPREAD; NONSTATIONARY; DEPENDENCE; DENSITY; ECOLOGY; HABITAT; RABIES;
D O I
10.1016/j.spasta.2017.02.005
中图分类号
P [天文学、地球科学];
学科分类号
07 ;
摘要
Analyzing spatial data often requires modeling dependencies created by a dynamic spatio-temporal data generating process. In many applications, a generalized linear mixed model (GLMM) is used with a random effect to account for spatial dependence and to provide optimal spatial predictions. Location-specific covariates are often included as fixed effects in a GLMM and may be collinear with the spatial random effect, which can negatively affect inference. We propose a dynamic approach to account for spatial dependence that incorporates scientific knowledge of the spatio-temporal data generating process. Our approach relies on a dynamic spatio-temporal model that explicitly incorporates location-specific covariates. We illustrate our approach with a spatially varying ecological diffusion model implemented using a computationally efficient homogenization technique. We apply our model to understand individual-level and location-specific risk factors associated with chronic wasting disease in white-tailed deer from Wisconsin, USA and estimate the location the disease was first introduced. We compare our approach to several existing methods that are commonly used in spatial statistics. Our spatio-temporal approach resulted in a higher predictive accuracy when compared to methods based on optimal spatial prediction, obviated confounding among the spatially indexed covariates and the spatial random effect, and provided additional information that will be important for containing disease outbreaks. (C) 2017 Elsevier B.V. All rights reserved.
引用
收藏
页码:206 / 220
页数:15
相关论文
共 67 条
[1]  
[Anonymous], 1999, INTERPOLATION SPATIA
[2]  
[Anonymous], 2008, Statistical Analysis and Modelling of Spatial Point Patterns
[3]   BAYESIAN IMAGE-RESTORATION, WITH 2 APPLICATIONS IN SPATIAL STATISTICS [J].
BESAG, J ;
YORK, J ;
MOLLIE, A .
ANNALS OF THE INSTITUTE OF STATISTICAL MATHEMATICS, 1991, 43 (01) :1-20
[4]   Generalized linear mixed models: a practical guide for ecology and evolution [J].
Bolker, Benjamin M. ;
Brooks, Mollie E. ;
Clark, Connie J. ;
Geange, Shane W. ;
Poulsen, John R. ;
Stevens, M. Henry H. ;
White, Jada-Simone S. .
TRENDS IN ECOLOGY & EVOLUTION, 2009, 24 (03) :127-135
[5]   A dynamic process convolution approach to modeling ambient particulate matter concentrations [J].
Calder, Catherine A. .
ENVIRONMETRICS, 2008, 19 (01) :39-48
[6]   Models for Bounded Systems with Continuous Dynamics [J].
Cangelosi, Amanda R. ;
Hooten, Mevin B. .
BIOMETRICS, 2009, 65 (03) :850-856
[7]   Elicitation by design in ecology: using expert opinion to inform priors for Bayesian statistical models [J].
Choy, Samantha Low ;
O'Leary, Rebecca ;
Mengersen, Kerrie .
ECOLOGY, 2009, 90 (01) :265-277
[8]  
Cressie N., 2011, STAT SPATIO TEMPORAL, DOI DOI 10.1016/0034-4257(81)90021-3
[9]  
Cressie NAC., 1993, STAT SPATIAL DATA, DOI [10.1002/9781119115151, DOI 10.1002/9781119115151]
[10]   Soil clay content underlies prion infection odds [J].
Walter, W. David ;
Walsh, Daniel P. ;
Farnsworth, Matthew L. ;
Winkelman, Dana L. ;
Miller, Michael W. .
NATURE COMMUNICATIONS, 2011, 2