The contribution of USH1C mutations to syndromic and non-syndromic deafness in the UK

被引:14
作者
Blaydon, DC
Mueller, RF
Hutchin, TP
Leroy, BP
Bhattacharya, SS
Bird, AC
Malcolm, S
Bitner-Glindzicz, M
机构
[1] Inst Child Hlth, Clin & Mol Genet Unit, London WC1N 1EH, England
[2] Univ Leeds, Mol Med Unit, Leeds, W Yorkshire, England
[3] Inst Ophthalmol, Dept Ophthalmol, London, England
[4] Inst Ophthalmol, Dept Clin Ophthalmol, London WC1H 9QS, England
关键词
deafness; DHPLC; haplotype; Usher syndrome;
D O I
10.1034/j.1399-0004.2003.00058.x
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Denaturing high-performance liquid chromatography (DHPLC) was used to screen 14 UK patients with Usher syndrome type 1, in order to assess the contribution of mutations in USH1C to type 1 Usher. In addition, 16 Caucasian sib pairs and two small consanguineous families with non-syndromic deafness, who were concordant for haplotypes around DFNB18, were also screened for mutations in the USH1C gene. Two Usher type 1 patients were found to have the 238-239insC mutation reported previously; one of Greek Cypriot origin was homozygous for the mutation and another Caucasian was heterozygous. This indicates that mutations in the USH1C gene make a greater contribution to Usher syndrome type 1 than originally thought, which has implications for the genetic testing of families with Usher syndrome in the UK. Analysis using intragenic single nucleotide polymorphisms (SNPs) revealed that the haplotypic background bearing this common mutation was not consistent across the gene in two families, and that there are either two haplotypes on which the mutation has arisen or that there has been a recombination on a single haplotype. We found no evidence of mutations in USH1C in the patients with non-syndromic deafness, suggesting that the gene is not a major contributor to autosomal-recessive non-syndromic deafness in the UK.
引用
收藏
页码:303 / 307
页数:5
相关论文
共 15 条
[1]   Nonsyndromic recessive deafness DFNB18 and Usher syndrome type IC are allelic mutations of USHIC [J].
Ahmed, ZM ;
Smith, TN ;
Riazuddin, S ;
Makishima, T ;
Ghosh, M ;
Bokhari, S ;
Menon, PSN ;
Deshmukh, D ;
Griffith, AJ ;
Riazuddin, S ;
Friedman, TB ;
Wilcox, ER .
HUMAN GENETICS, 2002, 110 (06) :527-531
[2]   Genetic heterogeneity of Usher syndrome: Analysis of 151 families with Usher type I [J].
Astuto, LM ;
Weston, MD ;
Carney, CA ;
Hoover, DM ;
Cremers, CWRJ ;
Wagenaar, M ;
Moller, C ;
Smith, RJH ;
Pieke-Dahl, S ;
Greenberg, J ;
Ramesar, R ;
Jacobson, SG ;
Ayuso, C ;
Heckenlively, JR ;
Tamayo, M ;
Gorin, MB ;
Reardon, W ;
Kimerling, WJ .
AMERICAN JOURNAL OF HUMAN GENETICS, 2000, 67 (06) :1569-1574
[3]   A recessive contiguous gene deletion causing infantile hyperinsulinism, enteropathy and deafness identifies the Usher type 1C gene [J].
Bitner-Glindzicz, M ;
Lindley, KJ ;
Rutland, P ;
Blaydon, D ;
Smith, VV ;
Milla, PJ ;
Hussain, K ;
Furth-Lavi, J ;
Cosgrove, KE ;
Shepherd, RM ;
Barnes, PD ;
O'Brien, RE ;
Farndon, PA ;
Sowden, J ;
Liu, XZ ;
Scanlan, MJ ;
Malcolm, S ;
Dunne, MJ ;
Aynsley-Green, A ;
Glaser, B .
NATURE GENETICS, 2000, 26 (01) :56-60
[4]   Comparison of fluorescent single-strand conformation polymorphism analysis and denaturing high-performance liquid chromatography for detection of EXT1 and EXT2 mutations in hereditary multiple exostoses [J].
Dobson-Stone, C ;
Cox, RD ;
Lonie, L ;
Southam, L ;
Fraser, M ;
Wise, C ;
Bernier, F ;
Hodgson, S ;
Porter, DE ;
Simpson, AHRW ;
Monaco, AP .
EUROPEAN JOURNAL OF HUMAN GENETICS, 2000, 8 (01) :24-32
[5]   A comparison of BRCA1 mutation analysis by direct sequencing, SSCP and DHPLC [J].
Gross, E ;
Arnold, N ;
Goette, J ;
Schwarz-Boeger, U ;
Kiechle, M .
HUMAN GENETICS, 1999, 105 (1-2) :72-78
[6]   Contig maps and genomic sequencing identify candidate genes in the usher 1C locus [J].
Higgins, MJ ;
Day, CD ;
Smilinich, NJ ;
Ni, L ;
Cooper, PR ;
Nowak, NJ ;
Davies, C ;
de Jong, PJ ;
Hejtmancik, F ;
Evans, GA ;
Smith, RJH ;
Shows, TB .
GENOME RESEARCH, 1998, 8 (01) :57-68
[7]   A gene for recessive nonsyndromic sensorineural deafness (DFNB18) maps to the chromosomal region 11p14-p15.1 containing the Usher syndrome type 1C gene [J].
Jain, PK ;
Lalwani, AK ;
Li, XC ;
Singleton, TL ;
Smith, TN ;
Chen, A ;
Deshmukh, D ;
Verma, IC ;
Smith, RJH ;
Wilcox, ER .
GENOMICS, 1998, 50 (02) :290-292
[8]  
KIMBERLING WJ, 1996, GENETICS HEARING IMP, P141
[9]   Identification of an autoimmune enteropathy-related 75-kilodalton antigen [J].
Kobayashi, I ;
Imamura, K ;
Kubota, M ;
Ishikawa, S ;
Yamada, M ;
Tonoki, H ;
Okano, M ;
Storch, WB ;
Moriuchi, T ;
Sakiyama, Y ;
Kobayashi, K .
GASTROENTEROLOGY, 1999, 117 (04) :823-830
[10]   Denaturing high performance liquid chromatography (DHPLC) used in the detection of germline and somatic mutations [J].
Liu, WG ;
Smith, DI ;
Rechtzigel, KJ ;
Thibodeau, SN ;
James, CD .
NUCLEIC ACIDS RESEARCH, 1998, 26 (06) :1396-1400