Solution structure of the cellulose-binding domain of the endoglucanase Z secreted by Erwinia chrysanthemi

被引:82
作者
Brun, E
Moriaud, F
Gans, P
Blackledge, MJ
Barras, F
Marion, D
机构
[1] CNRS, LCB, F-13402 Marseille 20, France
[2] CEA, CNRS, Inst Biol Struct Jean Pierre Ebel, F-38027 Grenoble 20, France
关键词
D O I
10.1021/bi9718494
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Two-dimensional proton nuclear magnetic resonance spectroscopy has been used to determine the three-dimensional structure of the 62 amino acid C-terminal cellulose-binding domain (CBD) of the endoglucanase Z (CBDEGZ), secreted by Erwinia chrysanthemi. An experimental data set comprising 958 interproton nOe-derived restraints was used to calculate 23 structures. The calculated structures have an average root mean-square deviation between Cys4 and Cys61 of 0.91 +/- 0.11 Angstrom for backbone atoms and 1.18 +/- 0.12 Angstrom for the heavy atoms. The CBDEGZ exhibits a skiboot shape based mainly on a triple antiparallel beta-sheet perpendicular to a less-ordered summital loop. Three aromatic rings (Trp18, Trp43, and Tyr44) are localized on one face of the protein and are exposed to the solvent in a conformation compatible with a cellulose-binding site. Based on its original folding, we have been able to relate the CBD sequence to those of several domains of unknown function occurring in several bacterial chitinases as well as other proteins. This study also provides a structural basis for analyzing the secretion-related information specific to the CBDEGZ.
引用
收藏
页码:16074 / 16086
页数:13
相关论文
共 59 条
[1]   EXTRACELLULAR ENZYMES AND PATHOGENESIS OF SOFT-ROT ERWINIA [J].
BARRAS, F ;
VANGIJSEGEM, F ;
CHATTERJEE, AK .
ANNUAL REVIEW OF PHYTOPATHOLOGY, 1994, 32 :201-234
[2]   MOLECULAR-DYNAMICS WITH COUPLING TO AN EXTERNAL BATH [J].
BERENDSEN, HJC ;
POSTMA, JPM ;
VANGUNSTEREN, WF ;
DINOLA, A ;
HAAK, JR .
JOURNAL OF CHEMICAL PHYSICS, 1984, 81 (08) :3684-3690
[3]   STRUCTURE AND DYNAMICS OF FERROCYTOCHROME C(553) FROM DESULFOVIBRIO-VULGARIS STUDIED BY NMR-SPECTROSCOPY AND RESTRAINED MOLECULAR-DYNAMICS [J].
BLACKLEDGE, MJ ;
MEDVEDEVA, S ;
PONCIN, M ;
GUERLESQUIN, F ;
BRUSCHI, M ;
MARION, D .
JOURNAL OF MOLECULAR BIOLOGY, 1995, 245 (05) :661-681
[4]   PERIPLASMIC DISULFIDE BOND FORMATION IS ESSENTIAL FOR CELLULASE SECRETION BY THE PLANT PATHOGEN ERWINIA-CHRYSANTHEMI [J].
BORTOLIGERMAN, I ;
BRUN, E ;
PY, B ;
CHIPPAUX, M ;
BARRAS, F .
MOLECULAR MICROBIOLOGY, 1994, 11 (03) :545-553
[5]   COHERENCE TRANSFER BY ISOTROPIC MIXING - APPLICATION TO PROTON CORRELATION SPECTROSCOPY [J].
BRAUNSCHWEILER, L ;
ERNST, RR .
JOURNAL OF MAGNETIC RESONANCE, 1983, 53 (03) :521-528
[6]   CHARMM - A PROGRAM FOR MACROMOLECULAR ENERGY, MINIMIZATION, AND DYNAMICS CALCULATIONS [J].
BROOKS, BR ;
BRUCCOLERI, RE ;
OLAFSON, BD ;
STATES, DJ ;
SWAMINATHAN, S ;
KARPLUS, M .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1983, 4 (02) :187-217
[7]  
BRUN E, 1995, EUR J BIOCHEM, V231, P142, DOI 10.1111/j.1432-1033.1995.0142f.x
[8]   AROMATIC-AROMATIC INTERACTION - A MECHANISM OF PROTEIN-STRUCTURE STABILIZATION [J].
BURLEY, SK ;
PETSKO, GA .
SCIENCE, 1985, 229 (4708) :23-28
[9]   IDENTIFICATION, CLASSIFICATION, AND ANALYSIS OF BETA-BULGES IN PROTEINS [J].
CHAN, AWE ;
HUTCHINSON, EG ;
HARRIS, D ;
THORNTON, JM .
PROTEIN SCIENCE, 1993, 2 (10) :1574-1590
[10]   SOLVENT-ACCESSIBLE SURFACES OF PROTEINS AND NUCLEIC-ACIDS [J].
CONNOLLY, ML .
SCIENCE, 1983, 221 (4612) :709-713