m6A regulators are associated with osteosarcoma metastasis and have prognostic significance A study based on public databases

被引:12
作者
Zhang, Wenpeng [1 ]
Wang, Lina [2 ]
Zhang, Ping [3 ]
Zhang, Quanbin [1 ]
机构
[1] Zibo Cent Hosp, Dept Orthopaed, Gongqingtuan West Rd 54, Zibo 256400, Shandong, Peoples R China
[2] Zibo Mental Hlth Ctr, Dept Clin Lab, Zibo, Shandong, Peoples R China
[3] Shandong Univ, Qilu Hosp, Huantai Branch, Dept Ear Nose Throat, Zibo, Shandong, Peoples R China
关键词
Gene Expression Omnibus; m6A regulators; metastasis; osteosarcoma; prognosis; the Cancer Genome Atlas; RNA METHYLATION REGULATORS; MESSENGER-RNA; DNA-DAMAGE; PROTEIN; DEMETHYLASE; METABOLISM; BINDING; WRITERS; UPDATE; YTHDC2;
D O I
10.1097/MD.0000000000025952
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Background: Osteosarcoma represents the most common malignant bone tumor with high metastatic potential and inferior prognosis. RNA methylation (N6-methyladenosine [m6A]) is a prevalent RNA modification that epigenetically influences numerous biological processes including tumorigenesis. This study aims to determine that m6A regulators are significant biomarkers for osteosarcoma, and establish a prognostic model to predict the survival of patients. Methods: In this study, we comprehensively analyzed the underlying associations between m6A regulators' mRNA expressions and metastasis as well as prognosis of osteosarcoma patients in the Cancer Genome Atlas. Multivariate Cox-regression analysis was used to screen regulators that were significantly associated with overall survival of osteosarcoma patients. Least absolute shrinkage and selection operator (LASSO) Cox-regression analysis was used for constructing m6A regulator-based osteosarcoma prognostic signature. Results: Some of the regulators exhibited aberrant mRNA levels between osteosarcoma samples with and without metastasis. Multivariate Cox-regression analysis identified several regulators with potential prognostic significance. A risk score formula consisted of methyltransferase-like 3, YTH domains of Homo sapiens, and fat mass and obesity-associated protein was obtained through which patients could be prognostically stratified independently of potential confounding factors. The signature was also significantly associated with the metastatic potential of osteosarcoma. All the analyses could be well reproduced in another independent osteosarcoma cohort from the Gene Expression Omnibus. Conclusions: In conclusion, this study first revealed potential roles of m6A regulators in osteosarcoma metastasis and prognosis, which should be helpful for its clinical decision-making.
引用
收藏
页数:8
相关论文
共 53 条
  • [1] Update on Survival in Osteosarcoma
    Anderson, Megan E.
    [J]. ORTHOPEDIC CLINICS OF NORTH AMERICA, 2016, 47 (01) : 283 - +
  • [2] m6A RNA methylation regulators contribute to malignant progression and have clinical prognostic impact in gliomas
    Chai, Rui-Chao
    Wu, Fan
    Wang, Qi-Xue
    Zhang, Shu
    Zhang, Ke-Nan
    Liu, Yu-Qing
    Zhao, Zheng
    Jiang, Tao
    Wang, Yong-Zhi
    Kang, Chun-Sheng
    [J]. AGING-US, 2019, 11 (04): : 1204 - 1225
  • [3] RNA N6-methyladenosine methyltransferase-like 3 promotes liver cancer progression through YTHDF2-dependent posttranscriptional silencing of SOCS2
    Chen, Mengnuo
    Wei, Lai
    Law, Cheuk-Ting
    Tsang, Felice Ho-Ching
    Shen, Jialing
    Cheng, Carol Lai-Hung
    Tsang, Long-Hin
    Ho, Daniel Wai-Hung
    Chiu, David Kung-Chun
    Lee, Joyce Man-Fong
    Wong, Carmen Chak-Lui
    Ng, Irene Oi-Lin
    Wong, Chun-Ming
    [J]. HEPATOLOGY, 2018, 67 (06) : 2254 - 2270
  • [4] N6-methyladenosine links RNA metabolism to cancer progression
    Dai, Dongjun
    Wang, Hanying
    Zhu, Liyuan
    Jin, Hongchuan
    Wang, Xian
    [J]. CELL DEATH & DISEASE, 2018, 9
  • [5] RNA N6-methyladenosine modification in cancers: current status and perspectives
    Deng, Xiaolan
    Su, Rui
    Weng, Hengyou
    Huang, Huilin
    Li, Zejuan
    Chen, Jianjun
    [J]. CELL RESEARCH, 2018, 28 (05) : 507 - 517
  • [6] YTHDF2 destabilizes m6A-containing RNA through direct recruitment of the CCR4-NOT deadenylase complex
    Du, Hao
    Zhao, Ya
    He, Jinqiu
    Zhang, Yao
    Xi, Hairui
    Liu, Mofang
    Ma, Jinbiao
    Wu, Ligang
    [J]. NATURE COMMUNICATIONS, 2016, 7
  • [7] Review of Osteosarcoma and Current Management
    Durfee R.A.
    Mohammed M.
    Luu H.H.
    [J]. Rheumatology and Therapy, 2016, 3 (2) : 221 - 243
  • [8] Erson-Bensan Ayse Elif, 2017, Microrna, V6, P97, DOI 10.2174/2211536606666170511102219
  • [9] Biomarkers of Osteosarcoma, Chondrosarcoma, and Ewing Sarcoma
    Evola, Francesco R.
    Costarella, Luciano
    Pavone, Vito
    Caff, Giuseppe
    Cannavo, Luca
    Sessa, Andrea
    Avondo, Sergio
    Sessa, Giuseppe
    [J]. FRONTIERS IN PHARMACOLOGY, 2017, 8
  • [10] An update on chemotherapy for osteosarcoma
    Ferrari, Stefano
    Serra, Massimo
    [J]. EXPERT OPINION ON PHARMACOTHERAPY, 2015, 16 (18) : 2727 - 2736